Alligator mississippiensis (American alligator): 102558993
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Entry
102558993 CDS
T03087
Symbol
NPHP4
Name
(RefSeq) nephrocystin 4
KO
K16478
nephrocystin-4
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
amj03037
]
102558993 (NPHP4)
Cilium and associated proteins [BR:
amj03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
102558993 (NPHP4)
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GFIT
Other DBs
NCBI-GeneID:
102558993
NCBI-ProteinID:
XP_014461291
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Position
Un
AA seq
1431 aa
AA seq
DB search
MSEWERVFVQNLTVPPHSQRRRQIRRESTAFQCVLKYIEGTLIKQRALEGLAGVEYQLRM
TLFDITYRHFFGRTWKSSTRPLKAIPGQPPRASFNETVYFHTSLNHPGIIIIVEVVATAR
KQDGTHQDLSCGFGIMHLFNAKSEPIDVAVKGKGLKLYHGTPRALLHPLLQDPIEKNKYM
TVMENSHLQCTLKLHPPLEAVYHLFPENLLMSGLQRIPGLLPAQGDTNDLFWKPQLMKSV
TWYLDKLCIHLYPSLEKFEEELLDSLNNNHSLKDNSMLSGNLVAIQERRLHIGVHNGLCF
VQTPQVAVLVPEAEAIRGRSDKKQGSSAKFSAMGQALVLRSRIHLTEMVRHPAFGIFFQL
EYVFCVPGGADSKALSTTSLNKAAYMHSIRWAVWNPLLDSDSSKVILPLHGSTLHNPAHV
LVYKTPPTSMSSEEVKQIESGTIQFCVSTNSEEHLGASPNTLSHVREELFCSKKQSTPSL
RSTPSPQIMASTQASTQGPGLSISQLSVSPHHVTKPPLQRPSDSLLPPSPGRGRRRRAQE
QVHGSGSITHLEADLSCGSLVQESPASDQLQELPFMPVHVPIVAMGAQASSSSTVLTRAS
LARLHAAGFPEILDCNKEPAEVLDPAAPVNFDPQREEADFFQSNEIVLQFLTFSRTPQAG
TEVTWPKTVYFTFQFYRFSQVTTPRLQLVKMDLADSTSSAPSSHILVPINKEGMLDSGTP
GLQLKYLVDPAFLKAGERRWFLRYLADHTLQIDIWDGDSLLLIGSAAVRLKHLLRQGRTA
VQVHHELEVISTEYEQDTTVMSGDVLRHGSVKPIGVHAVVKGRLHLCLANVGHLCEQRLK
QLNSLPPPRSRIVSSHDGTRGFHGGSLFSFSTCGAKNVSQAQKLADVDSELAAMLFSRLR
EVSIAFQHTTREASAIRRRKLERMVLVRQLESQEDLSRRQAALMGQHEQRIQHSRDLQII
DAYRERIKAESISNMLNQAITTKYVLYATLGTAEFFEFALKNPYSVQHTVTIEIDHPELS
VIVDTREWRHFKELTKTVTPIEEDMFHLHDNIRPQVYLRPKETVHIPFKYQTFLIDPVVM
MQGPPEVKFSKDTDATTPWTSNAMLTKHIKVSFTVNGGKPLTILSVTVEPQPHVVDHTFR
FYHPEMTFFKKSLRLPPWHTIPGAPAGVPGGEPEMYVRCSDPNIICETKKMGPGEPQDVF
LKVAGGPSPQIKTFFVAIYTDAWLATPLQIWKFYLHSLQRVDVSCVTGQLTRLSLVLRGT
QAIRKVKAYTSHMQELKVDPEGIFILPPHGVQDLHIGVRPQKTGSKFIYLNLVDVEYHQL
VSSWLVCVSCRQPLISKAFEITLPASGGKGSNKRITYTNPYPSRRMYFLHTNRPDLLQFK
EDSFELRGGEVYTIGLRFAPTQNTGEEEILIYINDHEDKNEETFCVKVVYQ
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaatgggaaagggtttttgtgcagaatctgactgtccctccgcactcgcaaagg
agacggcagatccggagggaatcaacagcatttcagtgtgtcctgaagtacatcgaggga
actttgattaagcagagagcactggaaggcttagctggagttgaataccagctccgcatg
accctctttgacatcacatatcgccatttctttgggagaacctggaaaagcagcaccagg
cccctgaaggctatcccaggacagccacccagagccagtttcaatgagacagtgtatttt
cacacatccttaaaccaccctggcatcatcatcattgtggaagtggtggccacagcaaga
aagcaagatgggacccatcaggatctctcctgtgggtttggaatcatgcacctgttcaac
gccaagtccgagccaatagatgtggctgtgaagggcaaagggctcaagctgtaccatggg
acaccacgagcattgctacacccactcctccaggaccctatagaaaagaacaaatacatg
actgtgatggagaacagtcaccttcagtgtaccctaaagctacacccacccctggaagct
gtatatcaccttttccctgagaacctgctgatgtctggactgcagagaattcctgggttg
ctgccagcacaaggagacacaaatgatcttttttggaaaccccagctcatgaaatcagtg
acatggtacttggataaactgtgcatccatctctacccttcattagaaaagtttgaggaa
gagctactggattcactcaacaacaatcactcacttaaggataactccatgctcagtggg
aacctggttgccattcaggagcgccggctgcacatcggggtccacaatggcctctgcttt
gttcagacacctcaggtagcagtgctggtgccagaggctgaggcgattcgggggcgctct
gacaagaaacaaggctccagtgctaaattcagtgccatgggccaggctctggttttgaga
agccgcattcatttgactgagatggttcgtcacccagcatttggaatcttcttccagctc
gagtatgtgttctgtgtgccaggtggagcagacagcaaggcactatccactacctctttg
aataaagcagcctacatgcattcaattcgatgggctgtttggaaccctctgctggactcg
gattcctcaaaagtgatcttaccactgcatggaagcaccctgcacaaccctgcccacgtg
ttggtttacaagacccctccaaccagcatgagctctgaagaggtgaagcagattgagtct
ggtaccatccagttctgtgtttccactaactcagaggaacatctcggtgcttccccaaat
actttaagtcatgtcagagaagagcttttctgctccaagaagcaatccacaccatctctc
cgttctacgccttcaccccagataatggcttccactcaagcttccactcagggacctggg
ttgtcgatctctcagttgtccgtgtcaccacaccacgtaacaaaacccccgttgcagcgg
cccagtgactctctacttcctccatctccagggagaggccgacgtcgacgcgcacaggag
caggtgcatggcagtggcagcataactcatctggaggctgacctcagctgtggctcgctg
gtccaagagtccccggcgagtgaccagctgcaggagttgcccttcatgccagtgcatgtg
ccaattgttgctatgggagcccaggcaagcagctctagcacagtgctcactcgggcctcc
ctagcccgcctacatgctgctggctttccagaaatcctggattgcaacaaggaaccagca
gaagttttggaccctgcagcccctgtgaattttgacccccaaagggaagaagctgacttc
tttcaaagcaatgaaatagttctacagttccttacctttagcaggactccccaggctggc
acagaggtgacatggccaaagactgtgtatttcaccttccagttctaccgcttctcacag
gtcaccacaccacggctgcagctggtcaaaatggacctcgctgactccacctcttcagcc
ccatcttcccacatcttagttccgattaacaaggagggaatgcttgacagtggcactcca
gggctgcagctaaagtatctggtagatcctgctttcctgaaggctggagaaagacgctgg
tttctgcgttacctagctgaccataccctacagattgacatctgggatggagactctttg
ctgctcattggatctgcggcagttaggttgaagcacctgctccgccagggtcggacagca
gttcaagtgcatcatgagttggaggtcatttcgactgaatatgagcaggacaccacagtg
atgagcggggacgttctccggcatggctcagtgaagcccattggagtccatgctgtggtg
aaaggtcgacttcatctgtgcttggctaatgttggtcacctgtgtgagcagaggctgaag
caactgaactctttgccaccaccccgttctcgcatcgtctcttcacatgatggaaccaga
ggctttcacggaggcagcttgttctccttcagcacttgtggggctaagaatgtctcccag
gcacagaagctggcagatgtggacagtgagctggctgccatgctattcagtcgcctgcgt
gaggtcagcattgccttccaacataccacccgtgaggccagtgccatacgcaggcggaag
ttggagaggatggtgctggtgagacagcttgaatcccaggaggacctcagcaggagacaa
gcagccctcatgggtcagcatgaacagcgcattcagcactccagggacctgcaaattatt
gatgcctaccgggagcgcatcaaggccgagagcatctccaacatgctgaatcaggccatc
accaccaaatacgtgctttatgctaccctggggacagcagagttctttgagtttgcgctg
aaaaacccgtacagcgtccaacatacagtgacgattgagattgaccacccggagctcagc
gttattgtggacacaagggaatggagacacttcaaagagctgaccaaaactgtcacacca
atagaagaagacatgttccatcttcatgataacatcaggcctcaggtctacctgcgcccc
aaggagactgttcacattccgtttaaataccagaccttcttgatagatcctgttgtcatg
atgcagggtcctcctgaagtgaaattcagtaaagacacagatgctacaacaccctggaca
tccaatgctatgctgacaaaacacattaaggtctccttcacggtgaatggtggaaagccc
ctcacaattctcagtgtgacagtggagccacagccccatgtggtggatcataccttccgc
ttctatcatccggagatgacattcttcaagaagtccctccggctcccgccttggcacacc
attccaggtgccccagctggagtgccaggaggggaacccgagatgtatgtccgctgcagt
gaccccaacatcatttgtgagacaaaaaaaatgggtcctggggaaccacaggatgtgttt
ttaaaagtagctggaggaccaagtccacagatcaaaacattctttgttgctatttacacg
gacgcgtggctggctactcccctccagatctggaagttttatctccactcactacagcgg
gtggacgtcagctgtgtgactggacagttgactcgcctgtctttggtactcaggggcaca
caggcaatcaggaaagtgaaagcttatacctctcacatgcaggagctgaaggtggaccca
gaaggcatatttattctccctccacatggagtgcaagatctgcacattggtgtgaggcct
cagaaaactggcagcaaatttatctacctcaacctcgtggatgtggagtaccatcagctt
gtgtcttcctggctggtctgtgtatcttgccgacagcctctcatttccaaggcctttgaa
ataacactccctgccagtggagggaaaggctcgaacaaacggatcacctacacaaacccc
tacccctcccggaggatgtattttctgcataccaaccggcccgacctgctgcaattcaag
gaggattcctttgagctcagaggtggggaggtatacaccatcggcttgcggtttgcacca
acccagaacactggtgaagaggagattctgatttatatcaatgaccatgaagataagaat
gaggaaaccttttgtgtgaaggttgtctaccaataa
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