Alligator mississippiensis (American alligator): 102559017
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Entry
102559017 CDS
T03087
Symbol
NISCH
Name
(RefSeq) nischarin
KO
K24095
nischarin
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
amj04990
]
102559017 (NISCH)
Domain-containing proteins not elsewhere classified [BR:
amj04990
]
Phox homology (PX) domain-containing proteins
Other PX domain-containing proteins
102559017 (NISCH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_4
PX
LRR_8
LRR_9
LRR_6
Motif
Other DBs
NCBI-GeneID:
102559017
NCBI-ProteinID:
XP_014460478
LinkDB
All DBs
Position
Un
AA seq
1422 aa
AA seq
DB search
MEAARPAEEAEEPPKEARVVGSELVENYTVYIIQVSVGSHQWTVKHRYSDFHDLHEKLVS
EKKIDKNLLPPKKIIGKNSKTLVEKRQKELEIYLQTLLIKFPMAAPKVLSCFLHFHLYEI
NGITAGLAEELFHRGEQLLMAGEVFSIRPLQLYAITQQLRQGKPTCANGDAKTDLGHVLD
FTCRLKYLKVTGTEGPFGNSNIHDSLLPFDLSIFKSLHQIEISHCGAKLIKGLTSSKHTL
ATMSVRFSATSMKEILVPEASEFDHWEPEGALSSGPVTAIIPTWRSLTTLDMSHNGISQI
DDSVKLIPKIEFLDLSHNGVSLVENLQHLYNLVHLDLSYNKLISLEGVHIKLGNIKTLNL
AGNLLESLCGLNKLYSLVNLDLSNNKIEQIDEIRNIGSLPCLEKVVLSNNPLSIIPDYRT
KVLAQFGDRASEVCLDNVITTEKELDTVEVLKAIQKAKEAKYKLNNSDKKISEDHRHIAA
SSKTNCTSFTVHPSSPSLPHPVNSSQEITFRETALASSLLQSSSLTPPEHTVPQRCFEIP
DSRFRSQAPTSLLDSSKEYGKDHHMCLDHLEEECYVVPDPHNTIILPFTCMSYTTNNQDF
IQHLSVLIRQAIQKSPHSSTKTESEGNLVSNFRTTDTEDGYFEMGLHGRDQTFEFSTTSD
SSAFDSTAAESTDVVKILWNFCIQVHKGLRQFASCLVLTDSVIAVFEIPHHGLKGHCQHI
PSALKLALCFPYTDLSEFGFLMPEICLTLKLKNSDNCLFIISDSQNLQDFYSCLHTCCSQ
HCMSMLSSSSLYCNKTSLQEFVHQLMGFYHISSDDTEIKGCFPAYLVYSNKTDVLKTLRQ
PDLVGDNKAWSKYVLCSAFYSTLCKSAEQSHYVFHPCWIFLTPQHLHIVKVDFHGLPGKS
INSEDAKNVFKLSRIPLASVVLHPTGHSIQQKGSFSDGHVLELRIGYRFVTAVFVLPHEK
FHFLRTYSLLRTLLQEIKTIIIFKASNMLESVRNHLLDSDNYSQRASFCKPHLTLSSVYP
SEFLMQKITEDNQIPVYLSVPLPLQYVAGLKGNAIIECFHNSIAEVENEELRHLVWSSVL
FYKTPDVEVTACVLLSTKAIYFLLDDSVIHASEQQLGFWNQKNSDYENSSFHLSCCLVLK
LNDLQSVNVGLFDQYFRITGHSANHIVTCLTRDSYSTHSFIQQLMAVLSLLARTPSPEPV
DKDFYSEFGNKSTGKMENYELIHSSKVKFVYPNEEEIGDLAFLVGEKMDSLASLQSLDIL
LYVLAFQVNHNEVIAEVSSLRHPKTLILTSSNLFLFNEDYISYPLPEFAKEPPKRDKYQL
TDGRRIRDLDRVLMGYQTYPQALTFVFDDVQNQDLMQNLTLDHFGDAFSAPEGYIKHESS
GNLEIQWCIFIPSAESREKLISLLARQWEILCGRELPLELTG
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgcggcccgcggaggaggccgaggagccgcccaaagaggcccgagtcgtc
ggctccgagctggtggagaactacacggtatatattattcaagtcagtgttggaagtcat
cagtggacagtcaaacatcgttacagtgacttccatgacctacacgaaaagcttgtttca
gaaaagaaaatagataaaaacctgttgcctcccaagaaaattattgggaaaaattctaaa
accttggtggaaaaaagacagaaggaattagaaatttacctgcaaacacttctgatcaag
ttccctatggctgcacccaaagtattatcatgcttcttacattttcatctatatgaaatc
aacgggatcacagctggattggctgaagagctctttcacagaggagaacaattgttaatg
gctggggaagtcttcagcattagaccattgcagttatatgctatcacgcaacagctgaga
caggggaaacctacgtgtgctaatggagatgccaaaacagatctaggtcatgtcctagat
ttcacatgtaggctaaaatatttaaaggtgactggcacagagggaccttttgggaacagc
aacattcatgatagtttgttaccttttgatctttcaatttttaaatctcttcatcaaata
gagataagtcactgtggtgcaaagcttattaaagggctgacttcatcaaagcacactcta
gccaccatgagcgttcgattttcagcaacatcaatgaaagaaatcctagtgcctgaagct
tctgaatttgaccattgggagccagagggtgcactttcaagtggtccagtaacagccatt
attccaacttggaggtctttaacaactttagatatgagtcacaatggtatctctcagatc
gatgattcagtgaaactaattccgaagattgaatttttagatctgagtcacaatggtgtg
tcactggtagaaaatttacagcatctctacaaccttgttcatctggacctgtcctacaac
aagcttatatcattagaaggtgttcatataaaacttggaaacatcaaaactttgaattta
gcaggaaacctcctggaaagtctatgtggtcttaacaaactatactctctcgtcaacttg
gatcttagtaacaacaaaatagaacagattgatgaaataaggaatataggaagccttcca
tgcctagagaaggtggtattatccaacaatcctttgagcatcattcctgattacaggacc
aaagtactagctcagtttggggacagagcctcagaggtctgtttggataatgttattacc
acagaaaaagaacttgatactgtagaggtgctgaaagctatacaaaaagcaaaggaggcc
aaatacaaactgaacaattctgacaaaaagatcagtgaggaccacaggcacattgctgcc
agctccaaaacaaactgtacttcttttactgttcatccttcctctccttctctgcctcat
cctgtcaactccagccaagaaataactttcagagaaacagccctagccagcagcttgttg
cagtccagtagtttgactccaccagaacatacagttccccagagatgctttgaaatacca
gactctagatttagaagtcaggcacctacttctctcttggactcatccaaagaatatgga
aaagatcatcacatgtgtttggaccatttagaggaggaatgttatgtggtgcctgaccca
cataacaccatcatcctgccttttacttgcatgtcctataccaccaacaaccaggatttt
atccagcacctttctgtcttgataagacaagcaattcagaaatcaccccattcctctaca
aaaacagaaagcgaagggaatcttgtgagtaatttcagaacaacagacactgaagatggc
tattttgaaatgggacttcatggaagagaccaaacttttgaatttagcactacttcagat
tcttcagcttttgatagcacagcagcagaaagcactgatgtagtaaaaattctctggaat
ttttgtattcaggttcataaaggactcaggcagtttgcctcttgtttggttttgactgat
agtgtaatagctgtgtttgagattcctcatcatggtttgaaaggacattgtcagcatatc
ccttctgccttgaagctagcactgtgtttcccatatactgatctctcagaatttggcttt
ctcatgcccgaaatatgtttaacactgaaactgaaaaacagtgacaactgcctgtttatc
atttcagactcccaaaatcttcaagatttctattcctgcttacatacatgttgctctcaa
cactgcatgtcaatgttatcaagttcctcactatattgtaacaaaacaagcctgcaagaa
tttgtccaccaactcatggggttttatcacatttcatcagatgacactgagataaaaggc
tgctttccagcatatcttgtttacagtaataaaactgacgttctaaaaaccttacgtcaa
ccagacttggtaggtgataacaaagcgtggtctaaatatgttttgtgttctgcattttat
tccacgttgtgtaaaagtgctgaacagagtcactatgtgttccatccttgctggatattt
ctaacaccacagcatttgcacatagtaaaggttgacttccatggacttcctggtaaatcc
ataaactctgaagatgcaaaaaatgtattcaaactgagcaggattccactagcttcagtt
gtgttgcatcctactggtcattccatccagcagaaaggttcattttcagatggacatgtg
ttggagttacgtattggatacagatttgttacagcagtttttgttctacctcatgagaag
ttccattttctaagaacctacagtctcttaagaacacttctgcaggaaattaagacaata
attattttcaaagcttcaaacatgttggaatctgtaaggaatcatctcttagattcagac
aactatagccagagagcaagcttttgcaagcctcatttgaccctgtcatctgtatatcca
tctgaattcttgatgcagaaaattacagaagataaccaaattccagtttacctttcagtc
cctctgcctcttcagtatgtggctgggctaaagggaaatgctattatagaatgtttccat
aacagcattgctgaggtggaaaatgaagagctgaggcatcttgtgtggtcttctgtttta
ttttataagactcctgatgtagaagtgacagcttgtgtgctgctctcaacaaaagcaatt
tacttcctgttggatgattctgtaattcatgctagtgagcaacagttgggcttttggaac
caaaaaaactcagattatgaaaatagctcttttcacctctcatgttgcttagtactaaaa
cttaatgatctgcaatcagtaaatgttggactttttgatcagtacttcaggattactgga
cattctgccaatcatatagtaacctgcctgactagagacagctacagtactcattctttt
atacagcagcttatggcagtgctatcattgctggcacgcacaccttcaccagaaccagta
gataaggacttttactctgaatttggaaataaaagtacaggaaaaatggagaattatgaa
ctgattcattctagcaaagtaaagtttgtttatcccaatgaagaggagatcggagacctt
gcttttctggtgggagagaagatggacagtttggctagtctccagtctctagatattcta
ctgtatgtcctggcatttcaagtgaaccataacgaagtaattgctgaagtcagtagttta
cgtcatcctaaaactcttattttaactagctcaaatttgttcctcttcaatgaggattat
atcagttacccactacctgaatttgctaaggaaccaccaaagagagacaaatatcagctt
acagatggaagacgaatccgggatttagatagggtacttatgggctatcagacatatcca
caggccctcacctttgtgtttgatgatgttcagaaccaagatttaatgcagaacctaacg
ttggatcactttggggatgctttcagtgccccagagggctacattaaacatgaaagcagt
ggaaatctagaaatccaatggtgcatcttcattccaagtgcagaaagccgtgaaaaacta
atttcactccttgcaagacagtgggagatcttgtgtggcagggaattacctttggaactt
actgggtaa
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