Alligator mississippiensis (American alligator): 102559073
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Entry
102559073 CDS
T03087
Symbol
DSCAM
Name
(RefSeq) DS cell adhesion molecule
KO
K06767
Down syndrome cell adhesion molecule
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
amj04515
]
102559073 (DSCAM)
Cell adhesion molecules [BR:
amj04515
]
Immunoglobulin superfamily
DSCAM family
102559073 (DSCAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
Ig_5
C2-set_2
Pur_ac_phosph_N
Ig_4
C1-set
Sp38
V-set_CD47
Interfer-bind
fn3_2
C2-set_3
ChitinaseA_N
DUF6377
ARM_TT21_4th
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
102559073
NCBI-ProteinID:
XP_019331604
LinkDB
All DBs
Position
Un
AA seq
2044 aa
AA seq
DB search
MLTTAFASEAILVSGNFTKVDYCLYLACFGKNAESAKAKVIKFFFFPDTNVFSEDLHASL
YFVNASLQEVVFASTTGTLVPCPAAGIPPVTLRWYLATGEEIYDVPGIRHVHPNGTLQIF
PFPPSSFNNLIHDNTYYCTAENPSGKIRSQDVHIKAVLREPYTVRVEDQKAMRGNVAVFK
CIIPSSVEAYITVVSWEKDTVSLVSGSRFRITSTGALYILDVQNEDGLYNYRCITRHRYT
GETRQSNSARLFVSDPANSSPSILDGFDHRKAMAGQRVELPCKASGHPAPKYRWLKDNVP
WEPDSRFQQTVTGLVIEDTRPSDSGKYVCEVWNNYGTAEMIGRLYVKQPLKATISPRKVK
SSVGSQVSLSCSVTGTEDQELSWYRNGEIINPGNNVRITGINRENLIMDGMAKSDGGAYQ
CFVRKDKMSAQDYVQVVLEDGTPKIISAFSEKVVSPGEPVSLMCNVKGTPLPTITWTLDE
DPIIKDGSHRISQIITSEGNVVSYLNISNTQVRDGGVYRCTANNSAGVVLYQARINVRGP
ASIRPMKNITAIAGRDTYIHCRVIGYPYYSIKWYKNSKLLPFNHRQVAFENNGTLKLSNV
QKEVDEGEYTCNVLVQPQLSTSQSVHVTVKVPPFIQPFESPRFSIGQRVFIPCVVVSGDL
PITITWQKDGRPIPDSLGVTIDNIDFTSSLRISNLSLLHNGNYTCIARNDAAAVEHQSQL
IVRVPPRFVVQPSDQDGIYGKAVILNCSAEGYPVPTIVWKYSKGAGVPQFQPIALNGRIQ
LLTNGSLLIKHVLEEDSGYYLCKVSNDVGADVSKSMYLTVKIPAMITSYPNTTLATQGQK
KEMSCTAHGEKPIIVRWEKEDRIINPEMSRYLVSTKEVGDEVISTLQILPTVREDSGFFS
CHAINSYGEDRGIIQLTVQEPPDPPEIEIREVRARSIALRWTMGFDGNSPITGYDIECKN
KSDSWDSVQRTKDVSPQLNQATIIDLHPSSTYNIRMYAKNRIGKSEASNELTITTDEAAP
DGPPQDVQLEPISSQSIRVTWKAPKKHLQNGIIRGYQIGYREYSAGGNFQFNIISIDTTG
DSEVYTLNNLKKFTQYGMVVQACNRAGIGPSSQEIITTTLEDVPSCPPGNVQATATSPET
ISISWSTLAKEALNGILQGFRVIYWANLMDGELGEIKNVTTTQPSLELDGLEKYTNYSIQ
VLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAAASASTVFVSWLPPLKLNGIIRKYTV
FCSHPYPTVISEFEASPDSFSYRIPNLSRNRQYSVWVVAVTAAGRGNSSEIITVEPLAKA
PARILTFSGTVTTPWMKDIILPCKAVGDPSPTVKWMKDSNGTPSLVMIDGRRSIFSNGSF
VIRTVKAEDSGYYSCVATNNWGSDEIILNLQVQVPPDQPRLTVSKTTSSSITLSWIPGDN
GGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLETLKCGTWYKFTLTAQNGVGPGRISE
IIEAKTLGKEPQFSKEQELFASINTTRVRLNLIGWNDGGCPITSFTLEYRPFGTTVWTTA
QRTSLSKSYILYDLQEATWYELQMRVCNSAGCAEKQAKFATLNYDGSTIPPLIKSVVQSE
EGLATNEGLKMLVTISCILVGVLLLFVLLLIVRRRRREQRLKRLRDAKSLAEMLMSKNTR
TSDTLNKQQQTLRMHIDIPRAQLLIEERDTMETIDDRSTVLLTDADFGETSKQKSLTVTH
TVHYQSVSQATGPLVDVSDARPGTNPTTRRSAKTGPTARNRYASQWTLNRPHPTISAHTL
TTDWRLPTPRAAGSVDKESDSYSVSPSQDTDRARSSMVSTESASSTYEELARAYEHAKME
EQLRHAKFTITECFISDTSSEQLTAGTNEYTDSLTSSTPSESGICRFTASPPKPQDGGRV
MNMAVPKAHRPGDLMHLPPYLRMDFLLNRGIPGTSRDLSLGQACLEPQKSRTLKRPTVLD
PIPMETSSTREVQSWQPGAVATLPQREGAELGQAAKMSSSQESLLDSRGHLKGNNPYAKS
YTLV
NT seq
6135 nt
NT seq
+upstream
nt +downstream
nt
atgctaacaacagcctttgcttctgaggcaattctagttagtgggaatttcactaaagta
gattactgcttgtatttagcctgctttggcaagaatgctgaatcagcaaaggcaaaggtg
atcaaatttttcttctttccagacactaatgttttcagtgaagatctacacgccagccta
tattttgtcaatgcatctttgcaagaggtagtgtttgctagcaccacaggaactctggtg
ccctgtcctgcagcagggatccctcctgtgacactcagatggtacctagcaacgggcgag
gagatctatgatgtcccagggatccgccacgtccaccccaatggcactctccaaattttc
cccttccctccttcgagctttaataacttaatccatgataacacttactattgcacagct
gaaaatccttcagggaaaatcagaagtcaggatgttcatattaaggccgttttacgggaa
ccctatactgtccgtgtggaggaccagaaagccatgagaggcaatgtagcggtcttcaag
tgcattatcccctcctctgtggaggcatacatcactgttgtctcatgggagaaagacaca
gtctcacttgtctcaggatctagatttcgcatcacatccacgggagccttgtatatttta
gatgtacagaatgaagatggattgtataattaccgatgtatcacacggcacagatacact
ggagaaacacgacagagcaacagcgcgagactttttgtatcagacccagcaaactcctct
ccatctattctggatgggtttgaccatcgtaaagccatggcagggcagcgagtggagctg
ccttgcaaagcatcggggcacccagcaccaaagtatcggtggctgaaggacaatgttcct
tgggagccagacagcaggtttcagcagacagtcacaggactagtgattgaagacacacgt
ccttcagattcaggcaaatatgtttgtgaagtgtggaacaattatggtactgctgaaatg
atagggcgcctctacgtaaaacaaccactaaaagccacaatcagcccacggaaagttaaa
agcagtgttggtagtcaagtgtccttgtcctgcagtgtaactgggacagaagaccaagaa
ctctcttggtatcggaatggtgaaatcatcaaccctggaaacaacgtgcggatcactggt
atcaaccgagagaacctcattatggatggcatggccaaaagtgatgggggagcataccag
tgctttgtacggaaggacaagatgtctgctcaagactacgttcaggttgtgctggaagat
ggaacacctaaaatcatttctgccttcagcgagaaggtggtgagcccaggagaacctgtc
tcccttatgtgcaatgtgaaggggacccctctacctacaatcacctggactctagacgaa
gatcccataatcaaagatggcagtcatcgtatcagccagattatcacctctgagggaaat
gtggtcagctacctgaatatctctaacactcaggtccgagatggcggagtttatcgctgt
actgccaacaactctgctggagtcgtcctgtaccaggctcgaataaacgtaagagggcca
gcaagcattcgaccaatgaaaaacatcacagcaatagcgggacgggatacctacattcat
tgtcgtgtgattggctacccatattactccatcaaatggtacaagaattctaaattgctt
ccttttaaccaccgtcaagtagcatttgaaaataatggaacgctgaaactatccaatgtg
cagaaggaagtggatgaaggggaatatacatgcaatgttttggttcaacctcagctgtcc
accagccagagtgtacatgtgactgtaaaagttccacctttcatccagccttttgagtct
ccaagattctccattgggcagcgagtcttcattccatgtgttgtagtctcaggggatttg
ccaatcacaataacctggcagaaggatggcaggccaatcccagacagtcttggagttacc
attgacaacattgacttcaccagctccttaaggatttctaatctttcactgctgcataat
gggaattacacctgtatagcaagaaatgacgcagcagctgtggagcaccaaagccaatta
attgtgagagttccccctcgatttgtggttcaaccaagtgaccaagacgggatttatgga
aaagctgtaatcctcaattgttctgcagaaggttatcctgttcctactattgtctggaag
tactcaaaaggtgctggtgtaccccagttccagccaattgccttgaatgggcgaatccag
cttctcacaaatggctccttgttgattaaacatgtgctggaggaagacagtggatactac
ctctgtaaggtcagcaatgatgtgggagcagacgtcagcaagtcaatgtacctcactgtt
aaaattcctgcaatgataacctcctatccaaacaccaccttagcaacacagggtcagaaa
aaagagatgagctgcacggcacatggagagaaacccatcatagtccgctgggaaaaagag
gatcgaattattaaccctgaaatgtcccgctatcttgtttctaccaaggaggtgggcgat
gaagtgatctctactctgcagattttaccaactgtgcgtgaagattctggcttcttttcc
tgccatgctatcaattcctatggagaggaccgtggaataattcagctcactgtgcaagag
cccccagaccctcctgaaatagaaatccgagaagtgagagcacgcagcattgccctcaga
tggaccatgggatttgatgggaacagcccaatcacaggctatgatattgagtgcaagaac
aagtctgactcctgggattctgttcagagaaccaaagatgtttctcctcagctgaatcaa
gccactatcattgacctccacccttcctccacctacaacattcgcatgtatgccaaaaat
cgcattggcaagagtgaggccagcaatgagctcactatcacaacagatgaagcagctcct
gacggcccaccgcaggatgttcagcttgagcccatatcttcacaaagcattagggtcacc
tggaaggctccaaagaagcatttgcaaaatgggattattcgcggataccagataggttac
cgggaatacagtgcagggggcaatttccaattcaacatcatcagtattgataccactggg
gacagtgaagtttataccttgaataacctgaaaaaattcacccagtatggcatggtggta
caggcttgtaaccgggctggaataggaccttcttctcaggaaatcatcaccactacccta
gaggatgtgcccagttgccctccagggaatgtccaagccactgctacatcaccagaaacc
atctctatttcctggtctacacttgccaaagaagccctgaacgggattctacagggattc
agggttatctactgggctaatctcatggatggagagctgggagagattaagaatgtcact
actactcagccctcgctagagcttgatggcttggaaaaatatactaactacagcattcaa
gtgctggcattcacacgagctggagatggagtcaggagtgagcaaattttcacccgcact
aaggaggatgttccaggtcctcctgctggagttaaagcagctgcagcttcagcctccact
gtatttgtgtcctggctgcctccccttaagttaaatggcatcatccgaaagtacacggta
ttctgctcacatccgtatcccacagtaatcagcgagtttgaagcctctcctgactcattt
tcctacagaattcccaatctgagtcggaatcgacaatacagtgtctgggtggtggctgtg
actgctgctggaagaggcaacagcagtgaaattatcactgtggaaccattagctaaagct
ccagccagaatcttgacattcagtggcacagtaacaaccccgtggatgaaggatatcatc
cttccttgcaaggccgttggggacccatcacctacagtcaaatggatgaaggatagtaac
gggacacccagtctagtgatgattgatgggcgaagaagtatctttagcaatggcagcttt
gtcatccgaactgtgaaagcagaggattctggatattacagctgtgtggccactaacaac
tggggatctgatgaaataatcttgaatttgcaggtgcaagttccaccagaccagcctaga
cttactgtgtccaaaaccacatcttcctctatcactctttcctggatacctggagacaat
ggtggcagttctatccgaggctatatactgcagtactcagaggataacagtgagcagtgg
ggtagttttcccattagccccagtgagagatcctaccgcttagagactttgaaatgtggc
acatggtacaaattcacactaactgctcagaatggagtgggaccagggcgcatcagtgag
atcatcgaagccaaaacacttggaaaagagccccagttttccaaagaacaagaactcttt
gccagtattaacaccactagagtgcgattgaaccttattggctggaatgatggtggttgt
ccaatcacctcctttactctggagtacaggccatttggaactacagtatggacaactgca
cagcggacatcgctttccaagtcttacatattgtatgacctccaggaggcaacttggtat
gagctgcaaatgagagtatgcaatagtgctggctgtgcagagaaacaagccaaattcgca
acactcaactatgacggcagtacaatccctccactcattaaatcggttgtccaaagtgag
gaagggctggcaaccaatgaagggctaaagatgctggtgaccatttcctgcatcttggtt
ggggtcttgctgctgtttgtgctcctgctgattgtacgaaggagaaggagggaacagaga
ctgaaaagactcagggatgcaaaaagtttggctgaaatgcttatgagtaagaataccagg
acatcagatacacttaacaagcagcaacagacactgaggatgcacatagacattcccagg
gctcagcttctgattgaggagagggacaccatggagaccattgatgacagatcaacagtc
ctattaactgatgcagattttggagaaacatcaaagcagaagtcattgactgtcactcat
actgtacattaccagtctgtctcgcaagctactggacctttagtggatgtttctgatgcc
cggccaggaacaaatcctaccacaagaagaagtgcaaaaactggccccacagctcgcaac
agatatgctagtcaatggactctcaacagaccccatcccaccatatcggcccacaccctc
accacagactggaggctgccaacacccagagctgcaggatcagtggacaaagaaagtgac
agctacagcgtcagtccctcacaggatacagatagagcaagaagcagtatggtctctaca
gaaagtgcctcctctacatatgaagaattagcaagagcctacgagcatgctaagatggaa
gagcagctgagacatgccaagttcaccatcacagaatgctttatatcagacacatcatca
gaacagttaacggcagggactaatgagtacacagacagtctgacctcaagcacaccatca
gaatcggggatttgcaggtttactgcatcaccccctaaacctcaggatggagggcgtgtg
atgaacatggcagttccaaaggcacatcggccaggtgatctcatgcatttgccaccgtat
cttagaatggactttttgttaaaccgtggcattccaggcacaagcagagacctgagtttg
gggcaagcctgcttggaacctcagaaaagccgaaccttgaagcgtcccacagttctggat
cccataccgatggagacatcctctacaagagaagtacagtcgtggcagccaggtgctgtg
gcaacattacctcagcgagaaggggctgagctgggacaggcagctaaaatgagcagctcc
caagaatccctgctagactcccggggccacttgaaaggaaataatccctacgcaaaatct
tacaccctggtataa
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integrated database retrieval system
