Alligator mississippiensis (American alligator): 102559093
Help
Entry
102559093 CDS
T03087
Symbol
APTX
Name
(RefSeq) aprataxin
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102559093 (APTX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amj03400
]
102559093 (APTX)
Enzymes [BR:
amj01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
102559093 (APTX)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
102559093 (APTX)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
102559093 (APTX)
DNA repair and recombination proteins [BR:
amj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
102559093 (APTX)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
102559093 (APTX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DcpS_C
FHA_2
zf-C2HE
HIT
FtsK_SpoIIIE_N
FHA
Motif
Other DBs
NCBI-GeneID:
102559093
NCBI-ProteinID:
XP_006266782
LinkDB
All DBs
Position
Un
AA seq
372 aa
AA seq
DB search
MTARRQLGRCRAAWSRGRAGSAIMLVCWLVRRDKCCPRIKLPHLKTVVIGRGPETEITDK
KCSRQQVQLKADCNKGYVWIKQIGVNPASIDLVNIGKDEEVKMKPGQVLHIVNKLYPCTI
QFLEEAGDPGTVSQGRLKAEKRSSEDSRNGNTENGSAKSMKMEASDLEDTNKSGSVGSSF
TSPSASSLSQKEYLGHWSQGLKVSMQDLNQQVYKDERVVAIKDKYPKARYHWLILPWDSI
SSLKSVTKEHLGLLEHMHAIGEKLVHQCPERENLQFRLGYHAIPSMSHIHLHVISQDFDS
PCLKTKKHWNSFTTEYFLNSQDVIEMIKTKGKVLVSGGTSELLKLPLRCHVCRQPQSTIP
QLKEHLKKHWPN
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgcggcggcagctgggccggtgtcgcgctgcctggagccgagggcgggcgggc
agtgcaataatgcttgtgtgttggctggtgaggagagataaatgctgcccaagaatcaag
ctgcctcacttaaaaacagtagtgatagggcgcggcccggagacggagataacagacaaa
aaatgttcacggcagcaggtacagctaaaagcagactgtaataaaggctatgtctggatc
aaacagattggtgtgaatccagccagcattgatttagtgaatattggcaaagatgaagaa
gtgaaaatgaagccggggcaggttctgcatattgtgaataaactttacccctgtactata
caattcttggaagaagcaggagatcctgggacagtgtcacaggggaggttaaaagctgag
aagaggtcatctgaagactctaggaatggtaacacagaaaatggatctgccaaaagtatg
aaaatggaggcatcggatttggaagatactaacaagtcgggcagtgtcggcagttctttt
acatctccatcagcaagctctctaagccaaaaagaatatttaggacattggagtcaaggc
ctgaaggtatcaatgcaagatctaaaccagcaggtctacaaagatgaaagggttgtagca
attaaggacaagtatcccaaagctcgttaccactggctcatcttaccttgggactccatc
tccagtttaaaatccgtgacaaaagagcatcttggactactggaacacatgcatgccatt
ggtgaaaagttggtccaccagtgtcctgagagggagaacttacagttcaggctgggttac
catgctattcccagcatgagtcacatacatctgcatgtaatcagccaggattttgattcc
ccttgccttaaaaccaaaaagcactggaattcttttaccacagaatacttcttgaactcc
caagatgtcatagagatgataaagaccaaaggaaaagtgctggtgagtggtgggacttca
gaactcctcaagttgcccctcagatgccatgtgtgtaggcaacctcaatcaaccatccca
cagttaaaggaacatctcaagaagcattggccaaactga
DBGET
integrated database retrieval system
