Alligator mississippiensis (American alligator): 102559434
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Entry
102559434 CDS
T03087
Symbol
ARAP1
Name
(RefSeq) ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102559434 (ARAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102559434 (ARAP1)
Membrane trafficking [BR:
amj04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
102559434 (ARAP1)
Endosome - Golgi transport
Arf GTPase associated proteins
102559434 (ARAP1)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
102559434 (ARAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH
RhoGAP
ArfGap
RA
PH_11
SAM_1
SAM_2
PH_8
PH_3
PH_6
PH_13
PH_2
DUF1033
Motif
Other DBs
NCBI-GeneID:
102559434
NCBI-ProteinID:
XP_019337431
LinkDB
All DBs
Position
Un
AA seq
1499 aa
AA seq
DB search
MADGDSLLVAEWLMALHLEQYTDNFEKSELWKVSDCRGLTDAALTRLGIVLPGHRKRILS
GLHKAFAEAPPAGEAPVLPARRPVPMKRHIFRASAGQAEQDVKGDPTAPACRKPVPMEPE
LPSGPGLVPPPIPPRVGCRPPVKFSPPAPPVLAEVHSAVQAEPPDLSPPPPSPLPAMDSS
MPAPAFAEGKGKPPLPPLPVKRHQLGAKAMSQKLPELLSRPPVLPPRAVSQKVPSSFLAI
EEPASPKTVPSAPPALLPRVKPPQLPPELPAKPPLLFLPEFDDSDYEEPWEDEVVAPVGD
MADKGEAETMRELPRTERPSSLFSDDEFIEEHYEPPPANGGSCWSDYGLSTLQPSPRLSL
GSSSWNSGSMDVSDPLAQLTPIIKAGWLDKNPPQGSYIYQKRWVKLEADYLRYFDSEKDA
YSKRFIPVTSITRVTAIGDQKFEVITTNRNFAFRAESDGERSEWIRTLQQIVDERKVKGT
EKMSTLQLDAADKFGFLELRGFKNKLFVVVVGDKVFLYKNMEDCRLGIGITYIEMNVGNV
KDVDRRGFDLTTPYRVFSFSADSDQEKEEWVEAMQHAIAEALSNSEVAERIWATESNRFC
ADCEAPQPDWASINLCVVICKRCAGEHRALGPGITKVRSLKMDRKVWTEELIELFQQISN
AVSNQFWAANVPPSEAINATSGTHERRHFLNAKYREGKYRRYHPLFGNQEELNKALCTTV
TTSDLAETQSLVFCGAEVTCFTGDPDFPTPIALAEQAEQRLQVEFLLHNKTSEIPRLEML
NSEDKHYSVVLPTVTHNGFLYKTPSMAKPVHERKAREEFSRRWCALNDSVLSYYENDRNA
VPNGEIRMSEIVCLATHPPDTHGFESTFEVFIESERLYLFGLESAEAARDWVKSIAKSFL
PLVAEPLLNHDFERIGRLHYKGGLSLQRAKEGWFALAQSTLYTCFEDSEKEEAVQLRKLQ
ELSIQGDNEVLVLVERRRTLYIQGERKLDFLGWVTAIQKAAGSSGDTLSEQQLTEADVPL
IVDRCIDYITQYGLTSEGIYRKSGQNSKTTGLLEMLRRDARSVRLKEGEHQVDDVSNTLK
RFFRDLGDGLFTRDGCQGWLRATALEREEERISEYRRLLNGLPTVNRATVKALINHLYRV
QCFSDENQMTTHNLAIVFGPTLFQTDGQDYKAGRVVEDLISHYVVIFSVNEQEMRRQQDE
ITAIFKMRVAGSSSGTQHAGDFICTIYLEEKKTEAEQHVKVPVSMTAEELTFEILDRRKI
VTKEKDYWSCFEVNEREEAERPLHYSEKVLPILHCLGTDSYLVVKRQVSMESMLLYLASR
VGDSKHGMMKFREERNLLGLGLSTGFHDRYFILNHSCLRLYKEVRSLKQRILMVEDSHRP
EKEWPVRNLRVYLGIKKKLRPPTCWGLTVFYENEKHEKQQWYLCCDTQMEMREWFATFLF
VKNGGNVWPSEPSRARALRAPPDSRLGNISLIPLRGNENEMRNSVAAFATDPLTLLRDV
NT seq
4500 nt
NT seq
+upstream
nt +downstream
nt
atggcagacggggactcgctgctggtggccgagtggctgatggccctgcacctggagcag
tacacggacaactttgagaagagcgagctctggaaggtgtccgactgccggggcctgacg
gacgcggcgctgacccgcctgggcatcgtgctgcccggacaccgcaagcgcatcctctct
gggctgcacaaagccttcgccgaggcgccgccggccggggaagcccccgtgctgcccgcc
cggaggccggtgcccatgaaacgccacatcttccgggccagcgcgggtcaggcggagcag
gacgtcaagggggaccctacggcaccagcctgcaggaagccggtgcccatggagccggag
ctcccctccggtcccggcttggtgcccccacccatcccgccccgggtgggctgtcgccct
ccggtcaagttctcccctccggcaccgcccgtcttagctgaggtccactccgcggtccaa
gccgagccgcccgacctcagccctccgcccccgtcccccctgcccgccatggacagctcg
atgccggcgccagcatttgctgaagggaagggaaagccgcctttgccccctctgccagtg
aagcggcaccagctgggggccaaggccatgtcccagaagctgcctgagttgctcagccgc
ccgcccgtgctgcctccccgggccgtgtcccagaaggtgccctccagctttctggcaata
gaagagccagcatcccccaagacggtgcccagtgccccacctgccctgctgccccgggtg
aaaccaccgcagctcccacccgagctgcctgccaagccgcccttgctctttctgcccgag
ttcgacgactcggactatgaggagccatgggaggacgaagtagtggctccggttggagac
atggctgacaagggggaggctgagaccatgagggagttgccgcgcactgagagacccagc
agcctcttcagcgatgatgagttcatcgaggaacactacgagcctcctcctgccaatgga
ggcagctgttggagtgactacggtctgagcaccctccagcccagtccccgcctgtccttg
ggcagctccagctggaacagcggcagcatggacgtctcggaccccctggcccagctcacg
cccatcatcaaagctggctggctggacaagaaccctccccaggggtcctacatctaccag
aagcgctgggtgaagctggaagccgactacctccgctattttgacagcgaaaaggatgcc
tactccaagcgcttcatcccggtgacctccatcacccgcgtgaccgccatcggggaccag
aagttcgaggtgatcacgaccaacaggaactttgccttccgggcggagagcgacggggag
aggagcgagtggataaggaccctgcaacagatagtggacgagcgcaaggtgaagggcacg
gagaagatgtccacgttgcagctggacgccgcggacaagttcggcttcctggagctgcgg
ggctttaaaaacaagctcttcgtggtggtggtgggagacaaggtctttctctacaagaac
atggaggattgccggctggggatcgggatcacttacatcgagatgaacgtggggaatgtg
aaggacgtggaccggaggggcttcgatctgacaaccccctacagggtctttagcttctcg
gcggactcggaccaggagaaggaggagtgggtggaggccatgcagcatgccattgccgag
gccctctccaactcggaggtggccgagaggatctgggccacggagtcgaaccggttctgt
gccgactgtgaggcgccgcagcccgactgggcctccatcaacctctgcgtcgtcatctgc
aagagatgtgcaggagagcaccgggcgctgggccccggcattaccaaagtgcggagcctg
aagatggacagaaaggtgtggacggaggagctgatcgagctcttccagcagatcagcaac
gccgtgtccaaccagttctgggcagccaatgtgccccccagcgaggccatcaatgccacc
agcgggacccacgagaggcggcacttccttaacgccaagtaccgggagggcaagtaccgg
cgctaccacccgctcttcgggaaccaagaggagctcaacaaggccctgtgcacgacggtg
acaaccagcgacctggcggagacccagtccctggtgttctgcggggccgaggtgacctgc
ttcaccggggaccccgacttcccgacccccatcgccttggctgaacaggctgagcagagg
ctgcaggtggagtttctgctccataacaaaacttcagagatcccccggctggagatgctg
aacagcgaggacaagcactactcggtggtcctgccgaccgtcacccacaacggcttcctc
tacaagacgccctccatggccaagcccgtgcacgagcgcaaggctcgggaagagttcagc
cgccggtggtgcgccctcaacgacagcgtcctcagctactacgagaacgaccgcaacgcc
gtgcccaacggcgagatccggatgagcgagattgtgtgcctggccacccacccacccgac
acccacgggttcgagagcacgttcgaggtcttcatcgagtcagagaggctctacctgttt
gggctggagagcgccgaggccgcgcgggactgggtgaagtccattgccaagtccttcctg
ccgctggtggccgagccgctgctgaaccacgactttgagcgcatcgggcggctgcactac
aagggcgggctcagcctgcagcgggccaaggagggctggttcgcgctggcccagtccacc
ctgtacacctgcttcgaggacagcgagaaggaggaggccgtccagctcaggaagctgcag
gagctgtccatccaaggagacaacgaggtgttggtgctggtggagaggcgcaggactctg
tacatccagggggagcggaaactggacttcctgggatgggtcactgccatccagaaggca
gccgggagctcaggtgacacgctgtctgagcagcagctcactgaagccgacgtgcccctc
attgtggaccggtgcatcgactacatcacgcagtacgggctgacgtcggagggcatctac
cgcaagagcgggcagaactccaagacaacggggctgctggagatgctgcggcgggacgca
cgcagcgtgcggctcaaggagggcgagcatcaggtggatgatgtctccaacacgctcaag
cgcttcttccgcgacctgggcgatgggctcttcacccgggacggctgccagggctggctg
agggccacagcccttgagagggaggaggagcggatcagcgagtaccgccggctcctgaat
gggctccccactgtgaacagagccaccgtgaaggccctcatcaaccacctgtaccgggtg
cagtgcttctccgacgagaaccagatgactacgcacaacctggccatcgtcttcgggccc
acgctcttccagacagatgggcaggactacaaagcgggtcgcgtggtagaggacctcatc
agccactatgtggtcatcttcagcgtgaatgagcaagagatgaggcggcagcaagacgag
atcacggccatcttcaagatgcgggtcgcgggctcctccagcggcacccagcatgccggg
gacttcatctgcaccatctacctggaggagaagaagacggaggcagagcagcacgtcaag
gtcccggtctctatgacggcggaggagctgactttcgagatcctggaccggcggaagatt
gtcacgaaggagaaggattactggagctgctttgaggtcaacgagcgggaggaggcagag
cgcccattgcactactcggagaaagtcctgcccatcctgcactgcctggggacggacagc
tacctggtggtgaagaggcaggtctccatggagagcatgctcctctacttggccagccgc
gtgggcgacagcaagcacggcatgatgaagttcagggaggagcgcaacctgctggggctg
gggctcagcaccggctttcacgaccgctacttcatcctcaaccacagctgcctgcggctc
tacaaggaagtgcggagcctgaagcagcggatcctcatggtggaagatagccacaggccg
gagaaggagtggccggtgaggaacctcagagtctacctgggaatcaagaagaagcttcgc
ccgcctacctgctggggcctcacggtgttttacgagaacgagaagcacgagaagcagcag
tggtacctgtgctgcgacacccagatggagatgcgggaatggtttgccaccttcctcttc
gtgaagaacggcgggaacgtgtggccgtcagagccctccagggcacgagcgttgcgggcg
ccgccggactccaggttgggtaacatctcgctcatcccactgcggggcaatgagaacgag
atgaggaacagtgtggctgctttcgctactgatccactaaccctccttcgggacgtgtga
DBGET
integrated database retrieval system
