Alligator mississippiensis (American alligator): 102559437
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Entry
102559437 CDS
T03087
Symbol
TMTC1
Name
(RefSeq) transmembrane and tetratricopeptide repeat containing 1
KO
K23424
protein O-mannosyl-transferase [EC:2.4.1.-]
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
amj01003
]
102559437 (TMTC1)
Glycosyltransferases [BR:
amj01003
]
O-Glycan biosynthesis
O-linked Man type
102559437 (TMTC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_11
TPR_16
TPR_8
TPR_14
TPR_17
TPR_19
TPR_12
TMTC_DUF1736
TPR_10
TPR_7
TPR_CcmH_CycH
TPR_9
TPR_15
TPR_Slam
ANAPC3
TPR-S
ARM_TT21_C
FAT
TPR_MalT
TPR_5
ARM_TT21_4th
HAT_PRP39_C
ARM_TT21_N
TPR_NPHP3
ARM_TT21_5th
Wzy_C_2
HAT_Syf1_CNRKL1_C
ARM_TT21_2nd
ChAPs
NatA_aux_su
TPR_3
HAT_PRP39_N
Mad3_BUB1_I
BTAD
Coatomer_E
Alkyl_sulf_dimr
RMD1-3
Motif
Other DBs
NCBI-GeneID:
102559437
NCBI-ProteinID:
XP_014464540
UniProt:
A0A151NID9
LinkDB
All DBs
Position
Un
AA seq
862 aa
AA seq
DB search
MADNTSHKSYRPLCTLTFKLNILLAGMNPFYFHAVNVILHCLVTVVLMYTCDKAVFKDCR
LAFVTALFFAVHPIHTEAVTGIVGRADVLACLLFLLAFLSYNRSVDQLYVGEHFPPTASP
FFLLLSLFLGTCAVLVKETGITVFGVCLVYDFFSLSCSGLKLRNGRVHQRFAWQPAASSS
ASLQIPLSSRENGKHRFAQKGTWNSCHPTSPEEQRSSSLSVSNKAMRAILSYLTANHNQN
FLYTARPFLKRAALVISYVLLVLYFRLWIMGGSMPMFSEQDNPASFSPYLLTRFLTYSYL
LAFNAWLLLAPITLCYDWQVGSIPLIESIWDARNLATILLVVVMMLLSLHCITAFKRLEH
REVLVGLLFLVFPFIPASNLFFRVGFVVAERVLYMPSMGYCILFVHGFKKLCTWLNKCGV
TAMTLSALLLLLLFSWKTVKQNEIWLSRESLFSSGVKTQPHNAKVHYNYANFLKDQGRHN
EAIYHYKTAVKLYPRHASALNNLGTLTKDLVEAKEYYRRALQLNPQHNRALFNLGNLIKS
QGKKEEAITLLRDSIKYGPEFADAYSSLASLLAEQERFKEAEEVYKAGIENCPESSDLRN
NYGVFLVDTGAPEKAVSHYQQAIQLGPNHHVAMVNLGRLYRSLGQNKEAEAWYKRALKVS
RKAEILSPLGALYYNTGRYEEALQVYREAAVLQPSNKEIRLALAQVLAMMGRTKEAEKMT
NHIVTEDAECLECYRLLSAIYSKQENYAKALEAIDKALQLKPKDPKVISELFFTKGNQLR
EQNLLEKAFENYKLAVELNPDQAQAWMNMGGIEHIKGNYVTARGYYKKALELVPNSKLLK
ENLAKLDRLEKRLQEVRGKDHT
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaacaccagccacaagtcctaccgcccgctttgcaccctcaccttcaagcta
aacatattactggctggtatgaacccattctatttccatgcagtgaatgtaattttacac
tgtctagtgactgttgtgctgatgtatacttgtgacaaagctgtattcaaggactgtcga
cttgcctttgtcacagctctgttctttgctgtgcatcccattcacacagaagctgtaacc
ggtattgtaggcagagcagatgtcttagcttgtctactatttctgttggcttttctctcc
tataataggagtgtggatcagctttatgttggggaacatttccctcccactgcctctccc
ttcttcttgctgcttagtttgtttcttgggacctgtgcagtgctggtgaaagaaactgga
atcactgtgtttggtgtgtgcttagtctatgacttcttttccctttcctgcagtggtctc
aaactgaggaatggcagggtccatcagagattcgcatggcagcctgcggcttcttcatcg
gcttcgctgcagattcctttgtccagcagggaaaatggaaagcaccgctttgctcagaaa
gggacctggaattcatgccatcccacatcacctgaagagcaacggagtagcagcctttct
gtctcaaacaaagccatgcgggctattcttagctacctgactgcaaatcacaaccagaat
ttcttgtatactgcacggccatttttaaagagagctgctttggttataagctatgtgctt
cttgttttgtatttccgtctctggataatgggagggtccatgccgatgttctcagaacag
gacaatccagcttcgttttcaccttacttactaacaagatttctaacttattcctacctt
ctggccttcaatgcttggcttctgctggcaccaattactttatgctacgattggcaggtc
gggagtattcctttgattgagtcaatatgggatgcgaggaatttagccacaattctcctg
gtggtggttatgatgttacttagtctgcattgcataacagcattcaagagactggagcac
agagaagttttggttggcctgttgttcctggttttcccatttattccagccagcaaccta
ttcttcagggtggggtttgtggtggcagaacgagtcctgtacatgcctagcatggggtac
tgtatcctttttgttcatggttttaaaaagctctgtacgtggttaaataaatgtggtgtt
actgccatgaccctctccgctctgctgctcctgctgctcttctcctggaaaactgtgaaa
cagaatgaaatctggttatcaagagaatccctcttcagttcaggagtgaagactcagccc
cataatgctaaggtgcattacaactatgccaattttctgaaagaccagggtcgtcacaat
gaagccatctaccactataaaactgccgtcaaactgtaccctcgtcatgcaagtgccctg
aataatcttgggacattgaccaaagacttggtggaggccaaggagtattacagaagggct
cttcagttaaacccacaacataatcgagctctcttcaatcttggaaacctgatcaagtcc
caagggaagaaggaggaagctataaccttattgagggattccattaaatatggtccagag
tttgcagatgcttactcaagcctggcttcactgctggctgaacaggaacgatttaaagaa
gcagaggaggtttacaaggctgggatagaaaactgtccagaaagctcagacctgcgtaac
aactatggtgttttcttagttgatactggggctcctgagaaagcagtgtcccactaccag
caggccatccagctcggcccaaatcatcacgttgccatggtaaacctgggccgactctac
cgctctttggggcagaacaaagaggctgaagcatggtacaaacgagctttgaaagtctca
cggaaagctgaaatcctgtccccgcttggagcgctgtactacaacacagggcgatacgag
gaagctttacaagtctacagggaagctgcagtgctgcagccttcgaacaaggagattcga
ctggcactggcccaggttttagcaatgatggggcgaacaaaggaggctgaaaagatgaca
aatcacattgtgacagaagatgctgagtgcctggagtgctatcgccttttatcagccatc
tacagcaagcaggagaattatgccaaggcattagaagctattgataaagctcttcagctg
aaaccaaaggatccaaaagtcatatcagagctcttttttactaaaggaaatcagctaaga
gaacagaaccttctggaaaaagcttttgagaactataaactggctgtagagctgaatcca
gatcaagcccaggcctggatgaacatgggaggcattgagcatattaaggggaattatgtc
actgcacgtggctattataagaaagctttagagctggttccaaacagcaagttgctgaag
gagaatctggccaaactggatcgcttagagaaacggttacaggaagtccggggaaaggac
cacacgtag
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