Alligator mississippiensis (American alligator): 102559618
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Entry
102559618 CDS
T03087
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03022
Basal transcription factors
amj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102559618 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
102559618 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amj03021
]
102559618 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
amj03400
]
102559618 (GTF2H1)
Transcription machinery [BR:
amj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
102559618 (GTF2H1)
DNA repair and recombination proteins [BR:
amj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
102559618 (GTF2H1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
102559618
NCBI-ProteinID:
XP_014457702
LinkDB
All DBs
Position
Un
AA seq
548 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTVSHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLSMNAVDSSAAHNKQDVGISAAFLADVRPQTDGC
NGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNLTEREFWTRFFQSHYFHRDRVNTGSKD
LFAECAKMDEKGLKTMVSQGVKNPLLDLMALEDKSLDEGYGVASAPSTSNSSKSIKENSN
AAIIKRFNHHSAMVLAAGLRKQEAHNDHYSETSSTDGNSRDSDFFQPPMKKVKLQESIEY
EDLRKNNSIKTIALNLKKSDRYYHGPTPIQSQQYATSQDIINSFHSIRQEMEAYVPRLTQ
VLSSGDAASTITALSPGGALMQGGTQQAINQMVPNDVQSELKHLYVAAGELLRHFWSCFP
VNTPFLEEKVMKMRSNLERFQVTKLCPFQEKIRRQYLSTNLVNHIEEMLQTAYNKFHIWQ
TRRMLKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaacctcttctgaagaagtgttactgatagtgaagaaggtacgtcaaaagaagcaa
gatggggctctctaccttatggctgaacggatagcctgggcacctgaaggcaaagaccga
ttcacagtcagccatatgtacgcagacataaaatgccagaaaattagtcctgaaggaaaa
gctaaaattcagcttcagctggtattgcatgcaggggacacaaccaacttccacttctcc
aatgaaagcacagcagtgaaggaacgagatgcagtgaaggaccttcttcagcagctgttg
cccaaattcaagaggaaagctaataaggaacttgaagaaaagaacagaatgctgcaagaa
gatcctgttttgtttcagctttataaagaccttgttgtgagccaggtaatcagtgctgag
gaattctgggccaaccgtttaagcatgaatgcagtggatagttctgcggcacataataag
caggatgtgggcatctctgcagcatttctggctgatgttcggcctcaaacggatggttgc
aatggtctgaggtataacttaacctccgatatcattgaatccatatttagaacatatccc
gcagtaaaaatgaaatatgcagaaaatgttccacataacctgactgaaagggaattctgg
acacgatttttccaatcccactatttccatcgggatagggtgaacacaggttcaaaagat
ctctttgctgaatgtgccaaaatggatgagaaagggttaaaaacaatggtgtctcaagga
gtgaaaaatcctctgttagatttaatggccttggaagataaatctttagatgagggttat
ggtgttgcctctgcaccatccacttcaaactcatcaaaatcgataaaagaaaatagcaat
gctgccattataaaacgctttaaccatcacagtgccatggttcttgcggctgggctcagg
aaacaagaagcgcacaatgatcattatagtgagaccagcagcacagatggaaactccaga
gactcggatttctttcagccaccaatgaaaaaggtgaagttacaggaatctattgaatat
gaagatttaagaaagaataatagcattaaaactattgcactaaacctaaagaaatctgat
cggtattatcatggtccaactccaattcagtcacagcaatatgcaaccagtcaggatatt
attaattcttttcatagtattagacaagaaatggaagcctatgtacccagactaactcag
gttctttcaagtggtgatgctgctagcaccatcacagccctatcacctgggggagcactt
atgcagggtggaacacagcaagccataaaccagatggtgccaaatgatgttcagtctgaa
ctgaaacacttgtatgtggctgcaggggagctgctgcgacacttctggtcctgctttcct
gttaatacaccattcctagaagaaaaggttatgaaaatgaggagtaatttggaaagattt
caagttacaaagctctgcccattccaagaaaaaatccggagacaatatttaagcacaaac
ttggtaaatcatatagaagagatgttgcagacagcctacaataagttccacatttggcaa
acccggcgtatgttaaagaaaacgtga
DBGET
integrated database retrieval system
