Alligator mississippiensis (American alligator): 102559653
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Entry
102559653 CDS
T03087
Symbol
SS18L1
Name
(RefSeq) SS18L1, nBAF chromatin remodeling complex subunit
KO
K15623
protein SSXT
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102559653 (SS18L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amj03036
]
102559653 (SS18L1)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102559653 (SS18L1)
GBAF(ncBAF) complex
102559653 (SS18L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
102559653
NCBI-ProteinID:
XP_006274384
UniProt:
A0A151NZJ1
LinkDB
All DBs
Position
Un
AA seq
402 aa
AA seq
DB search
MSVAFASARPRAKGEVTQQTIQKMLDENHHLIQCIMDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQNMNLGPGGMTQSASSQSLHSQSNLSDAIGTGLPPSSLMQ
SQISNGPSHVSMQQSGQNTMPTTSLSMTVSSHATGPGYSHTVPASQNVPMQGQGSIGNYV
SRTNINMQSNPVSMMHQQVATSHYNSAQGGSQHYQGQSSIAMMSQSNQGNSMMGQRPMGP
YRASQQGSSQQYMGQEEYYSEQYSHGQGSSEPMNQQYYPDGHSDYAYQQSSYTEQSYDRS
FEDSTQHYYEGGNSQYSQQQAGYQQGAAQQQTYSQQQYPNQQSYPGQQQGYGPAQGASSQ
YSSYQQGQGQQYGSYRASQTGPSAQQQRPYGYEQGQYGNYQQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcgccttcgcctccgcccggcccagggccaagggcgaggtcacgcagcaaacc
atccagaagatgctagatgaaaatcatcacttaatacagtgtattatggactatcagagc
aaaggcaaaacggcagaatgtacccaataccaacaaatcttgcacagaaatctggtttac
ttggcaacaatagcagattcaaaccagaacatgcagtcgttgcttcctgctccgccaacg
caaaacatgaacttgggcccaggcggaatgactcagagcgcatccagccagtccctccat
tcacagagcaatctcagcgatgcgattgggacaggccttcctccctcctccctcatgcag
agtcagattagcaatggtcccagtcatgtgtctatgcagcagtcaggccagaataccatg
cccaccacctccttgagcatgactgtcagcagtcatgccacggggcctggttacagccat
acagtgcctgcatctcagaacgtgccaatgcaaggccaggggtcaataggcaattatgtg
tctcgaacaaatatcaacatgcagtctaatccagtctccatgatgcaccaacaagtggca
acgtcacattataattcagcacaaggagggagccaacattaccaaggacagtcctccatt
gccatgatgagtcagagcaaccaaggcaacagcatgatgggacagcgacccatgggtccc
tacagagcttcacagcaaggttcctctcaacagtacatggggcaggaggaatattacagt
gaacagtacagccatggacaaggctcgtcagagcctatgaaccagcaatattatccagat
ggtcatagtgattatgcatatcagcagtcatcctacactgagcagagctatgacaggtcg
tttgaggactctacacaacattactatgaaggaggaaattctcagtatagccagcaacag
gcaggataccaacagggagctgcgcaacagcaaacgtattcacagcagcagtacccaaat
cagcagagctacccgggacagcaacaaggatatggtcctgcacagggagcctcgtctcag
tattccagctaccaacagggacaggggcagcagtatggaagttatagagcttctcagaca
ggaccatctgctcaacaacagaggccttatggctacgagcagggccaatatggaaactac
cagcaataa
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