KEGG   Alligator mississippiensis (American alligator): 102559704
Entry
102559704         CDS       T03087                                 
Symbol
WDR1
Name
(RefSeq) WD repeat domain 1
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
amj  Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:amj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:amj04990]
    102559704 (WDR1)
Domain-containing proteins not elsewhere classified [BR:amj04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   102559704 (WDR1)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_HPS5 eIF2A Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N Beta-prop_SPT8 WDR90_beta-prop_4th NBCH_WD40 PEP5_VPS11_N Ge1_WD40 Beta-prop_EIPR1 RMC1_N WD40_RFWD3 WDR54 PROPPIN Beta-prop_ELP1_1st Beta-prop_DCAF12 Beta-prop_NWD2_C Beta-prop_WDR11_1st Beta-prop_ELP1_2nd DUF7165 PQQ DUF5711 Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 102559704
NCBI-ProteinID: XP_006264792
UniProt: A0A151P9Q4
LinkDB
Position
Un
AA seq 607 aa
MPYEIKKVFASLPQVERGVSKILGGDPKGNSFLYANGKCVVIRNIDNPAIADIYTEHAHQ
VVVAKYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVV
GEGREKFGAVFLWDSGSSVGEITGHNKVINSVDLKQTRPYRLATGSDDNCAAFFEGPPFK
FKFTISDHTRFVNCVRFSPDGNRFATASADGQIFIYDGKTGEKICCLGGNKAHDGGIYAI
SWSPDSSQLLSASGDKTSKIWDVGANSVVNTFNMGSNVLDQQLGCLWQKDHLLSVSLSGY
INYLDKNNPSKPLRVIKGHSKSIQCLTVHKNGGKSYIYSGSHDGHINYWDSETGENDGFF
GKGHTNQVSRMAVDEMDQLVSCSMDDTVRYTSLSKKDYSGLDAIKMDVQPKCLAVGPGGY
TVVVCIGQIILMKDKKKCFVIDDPGYEPEAVAVQPGGSTVAVGGLDGNVHLYSIQGMSLK
NAERTLEAKGPVTDLAYSHDGAFLAVCDANKVVTVFSVADGYAEHNVFYGHHAKIVCIAW
SPDNEHFASGGMDMMVYVWTLSDAETSIKIPDAHRLHHVSSLAWLDEHTLITTSHDASVK
EWSISYK
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgccgtacgagatcaagaaggtgttcgccagcctcccccaggtggagcggggcgtctcc
aagatcctcggaggggatcccaaaggcaacagctttctgtacgccaacgggaagtgcgtc
gtcatcaggaacatcgacaatccagcaattgcagacatctacaccgagcatgcccatcaa
gtagtggttgccaagtatgcacccagtggattctacatagcatctggagatgtctctgga
aagcttagaatctgggataccacacagaaggaacacttactgaagtatgaatatcagcct
tttgcaggaaaaataaaggatattgcttggactgaagacagcaagaggattgcagttgtt
ggagaaggacgagaaaaatttggagctgtgttcctgtgggattctggctcttcagtagga
gagatcactgggcacaacaaagtgatcaatagtgtggatttaaagcaaacaaggccttac
cgactggcaactggcagtgatgacaactgtgctgcattctttgagggaccaccattcaaa
ttcaagtttacaataagtgaccacacccgctttgtgaactgtgtgaggttctctcctgat
gggaacaggtttgctacagctagtgcagatggccagatttttatttacgatggaaagact
ggagagaaaatttgttgtctgggtggaaataaagcacatgatggaggaatttatgctatt
agctggagtcctgacagcagccagttactttctgcttctggagataaaacttctaaaatt
tgggatgttggtgctaactctgtagtcaacacatttaacatgggatcaaatgttctggat
cagcagttgggttgcttgtggcaaaaagaccatttgctgagcgtctccctctctggctac
atcaactatttggataagaacaatccaagtaagcctttacgtgtcataaagggtcacagt
aaatcaattcagtgtctcacagtgcataaaaatggtggtaaatcctatatttactctgga
agtcatgatggacatattaattattgggattctgaaactggagagaatgatggctttttt
gggaaaggccatacaaaccaggtttctaggatggctgtagacgagatggatcagctggtc
agttgcagtatggatgacactgtgcgttacaccagcctcagcaagaaagactacagtggt
ctggatgctataaaaatggatgttcaaccaaaatgtttagctgttggtcctggtggatat
acagtagttgtatgcattggacaaatcatcttgatgaaggataagaagaaatgttttgta
atcgatgatcctggttacgagccagaagctgtagcagttcagccaggaggcagtactgta
gccgtgggaggattggatggaaatgtccacttatattcaatccaaggaatgtccttgaaa
aatgctgagaggactttggaagctaaaggtcctgtgactgacctggcatattctcatgat
ggtgcctttcttgcagtttgtgatgcaaacaaagttgttactgtcttcagtgttgctgat
ggctatgcggaacacaatgtattttatggacaccacgcaaaaattgtttgcattgcttgg
tcaccagacaatgagcattttgcttctggaggtatggatatgatggtgtatgtttggacc
ttaagtgacgcagagactagcatcaagataccagatgctcatagattacatcatgtaagc
agcttggcatggctagatgaacataccctgataacaacatcccatgatgcttctgtcaaa
gagtggtctatctcctacaaatga

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