Alligator mississippiensis (American alligator): 102559841
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Entry
102559841 CDS
T03087
Symbol
TFIP11
Name
(RefSeq) tuftelin interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amj03041
]
102559841 (TFIP11)
Spliceosome [BR:
amj03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
102559841 (TFIP11)
Other components
Complex C specific factors
102559841 (TFIP11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
102559841
NCBI-ProteinID:
XP_006261823
LinkDB
All DBs
Position
Un
AA seq
828 aa
AA seq
DB search
MSMSHLYGQDEEGEVEMESFEITDWDLQNEFNPNRQRHRQTKEEATYGIWAERDSDDERP
SFGGKRSRDYSAPVNFISAGLRKPAAEEEVEDDSDEDDEKPIKQEELPKEVVPKKLKTGG
NFKPSQKGFAGGNKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIISPIEAKQ
RKGKGAVGAYGSERTSQSLQDFPVVDSEEEAEEAFQKDLSQWRKDPNGGKKKPKYSYKTV
EELKAKGRIGKQLSAPQKELSQVKVIDMTGREQKVYYSYSQISHKHNIPDDSPQQPLGKD
SKPQGFALPELEHNLQLLIDITEQEIIQNDRQLQYERDMVINLTHEIQKISEVLTHEETA
IGNLSKVLEMVEECERRMMPNCSNPLTLDECAKIFGTLQDKYYEEYRMSDRVDLAVAIVF
PLMKDYFKSWDPLKDCTYGTDVIAKWKTLLENDQLLSLSGQDLTTDAFHRLMWEIWMPYV
RNIITQWQPRNCGPMVDFLDSWVHVIPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIH
SWIHPWLPLMQARLEPLYSPIRNKLANALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMV
KNIVPKLGMCLHELVINPHQQHMDAFYWVVDWAGMISVSSLVGLLEKHFFPKWLQVLCSW
LSNSPNYEEITKWYLGWKSMFSDQVLAHPSIKEKFNEALDIMNRAVSSSVGGYMQPGARE
NIAYLTHTERRKDFQYEAMQERREAENMAQRGIGMAASSVPMNFKDLIQTKAEEHNIVFM
PVIGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgtcgcacctgtacgggcaggatgaggagggcgaggtggagatggagagcttc
gagatcacggactgggacctgcagaacgagttcaaccccaaccgccagcggcaccggcag
accaaggaggaggccacctacggcatctgggccgagcgcgactccgacgacgagcggccc
agcttcggcggcaagcgatctcgagactactcagcccctgtcaattttatcagcgccggg
ctgcgaaagcctgcagcagaggaggaggtggaagatgactcggacgaggatgatgagaaa
cctattaagcaggaagaattgcccaaggaggttgtaccaaagaagttaaaaacgggtggt
aatttcaaacccagccagaaaggatttgcaggagggaataagtctttcatggactttggc
agctgggagagacacaccaagggaataggacaaaaacttcttcagaaaatgggttacgtc
cctggcaggggtcttggaaaaaatgctcaaggtatcatcagtccgatcgaggccaagcaa
aggaaaggcaaaggagctgtgggcgcgtatggctctgagcgaaccagtcagtcgttgcag
gacttccctgttgttgactcagaagaagaagcagaagaggcatttcagaaagatctcagt
cagtggagaaaagatcccaacggaggcaagaagaaacccaaatactcctacaagactgtg
gaggaactgaaagccaagggcaggattggcaagcagctctcagcccctcagaaagagctg
tcccaagttaaggttatcgacatgactggccgcgaacagaaggtctattacagctacagt
caaatcagccacaagcacaatatcccagatgacagccctcagcagccactgggcaaagac
tccaagccccaaggatttgccttgccagagctggagcacaacttgcagcttctgattgat
atcacggagcaggagatcatccagaatgaccggcaactacagtacgagagggacatggtt
atcaacctgacccacgagatacagaagatatcagaagttctcacgcacgaggagacggcc
attggcaacctcagcaaggtgctggagatggtagaggagtgcgagaggcggatgatgccc
aactgcagcaacccccttacactggatgagtgcgccaagatctttgggaccctgcaggac
aaatactacgaggagtatcgcatgtccgacagggtggacttggccgtggctatcgtgttt
cctctcatgaaggattacttcaaaagctgggatcctctcaaggactgcacgtacggcaca
gatgttatagccaagtggaaaaccctcttggaaaatgatcagctgttgtctctcagtggg
caggacctaaccacagatgcctttcacaggctgatgtgggaaatctggatgccatatgtg
agaaacatcataacacaatggcagccaagaaactgtggcccaatggtggacttcctagac
agctgggttcatgttatccctgtctggatactggataacattctggaccagctcatcttc
cccaagctacagaaggaggttgaaaactggaaccctctgacggacactgtcccgatccac
tcgtggattcacccctggctgccactgatgcaggctcgcttagagcccttgtattctccg
atccgaaacaagctggcgaatgccctgcagaagtggcaccccagcgactcttcagccaag
ctgatcctgcagccttggaaggacgtgttcacgcccggatcgtgggaagctttcatggtc
aaaaacattgtgcccaagctagggatgtgcctccacgagcttgtcattaatcctcaccag
cagcacatggatgccttttactgggtggtcgactgggcaggcatgatctctgtgtccagc
ctcgttgggctgctggagaagcacttcttccccaagtggctgcaggtgctgtgctcctgg
cttagcaacagccccaattacgaagagatcaccaagtggtaccttggctggaaatccatg
ttctcagaccaggtcttggcgcatccgtcaatcaaggagaagtttaatgaagcacttgat
atcatgaaccgggctgtctcctccagcgtcggcggctacatgcaaccaggcgcccgggag
aacatcgcctacctcactcacacggagcggaggaaggacttccagtacgaagccatgcaa
gagcggcgagaggcggagaacatggcccagcggggcattggcatggccgccagctccgtg
cccatgaactttaaggacctgatccagaccaaagcagaggagcacaacattgtcttcatg
cctgtgattgggaagcgacacgaggggaagcagctgtacacgtttgggcggattgtgatt
tacatcgaccggggcgttgtgttcgtacagggagaaaagacttgggtcccaacttctctg
cagagcctcattgatatggctaaataa
DBGET
integrated database retrieval system
