Alligator mississippiensis (American alligator): 102559850
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Entry
102559850 CDS
T03087
Symbol
USP42
Name
(RefSeq) ubiquitin specific peptidase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amj01002
]
102559850 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amj04121
]
102559850 (USP42)
Enzymes [BR:
amj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102559850 (USP42)
Peptidases and inhibitors [BR:
amj01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102559850 (USP42)
Ubiquitin system [BR:
amj04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102559850 (USP42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
102559850
NCBI-ProteinID:
XP_019350159
LinkDB
All DBs
Position
Un
AA seq
952 aa
AA seq
DB search
MTIVDKGSDSSNPISGQNQTGSSVGPPNEEMDSDSSSWGTVSSLDVPNHRISLGPVPGAT
DYSSSPVSEKPKPSAQKDQSVNDGIAPPQKVLFPAEKICLKWQQSHRVGAGLQNLGNTCF
LNSILQCLTYTPPLANYMLSYEHSKTCHEQGFCMMCIMQTHINQALSNSGSVIKPMAVIN
DLRRIAKHFRFGNQEDAHEFLRYTVDAMQKACLNGSTKLDRPTQATTLIHQIFGGYLRSR
VKCSNCKGVSDTFEPYLDIALEIKTAQSVSKALELFVKPEQLDGENCYKCSRCKKTVPAS
KRFTIHRSSNVLTISLKRFANFSGGKISKDVKYSEFLDLRPFMSQQNGEPVLYTLYAVLV
HTGFSCHAGHYFAYIKSCNAQWYQMNDSIVAITDIRTVLNQQAYMLFYIRSSDVKNGELI
YSIPGQSSPRPAISQRVVNSKQTVSGFIGPQLPPHLIKTSGHLNGTGSLKETPSSSVVCA
SNVTLTRPNSAPPSTSIQNWTINRPTIPDPSKKQKITISIHNKLPARQSLAQPNLHNNSL
ESLSKPVPSSTITNSSAVQSTSSASTMSVATKVPKQLATSEACSKAVLNGKSKLSSSTLV
PYGAESSEESDEDSKALVKENGHKKPVNGILIGSVASSLQNSCSSYQDAEKEVPQHELPK
TDRVNGDKVNGAICLDNNSKDNGLKLDDSTCQTKALKTTETFFPKMNGLHGKMCATLPSV
PEDKILESFKFSQVKTSSEDISITGTEKTDHSIPNDCCNSQGPFAASAPETISTKEGLPS
KFSIFLVLGVGFFRHYQDSDASMTLSDAEIYKHKKKKKKKKKHAKRSEGFFEHADPHAQK
QGNSEMNRTWEKKEDSDLTDDTPVEEHGRHGYERLHEEDANSSLKKKCLEGGKENSYPVS
REDSKATILPSHKDHGQTAIKSLDGTFAYADETRWKVSGKLSLQEKLASHRF
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgactatagttgacaagggatctgactcttcaaaccccatatctggtcagaatcaaact
ggcagctctgtgggaccccctaatgaagagatggactcagactcttccagctggggcact
gtgtcatctctggacgttccaaaccacagaatctctttgggaccagtacctggagctaca
gattattctagttcacctgtatctgaaaaacccaagccttcagctcagaaagatcagtct
gtaaacgatggcatcgctccaccacagaaggttctttttccagcagagaagatttgtctg
aagtggcagcaatcccatagagttggagctggtctccagaaccttggcaatacctgtttt
ctcaactctatcctgcaatgtttgacttacacaccccctcttgccaattacatgctttct
tatgaacactccaagacatgtcatgagcaaggattctgcatgatgtgtataatgcaaact
cacattaaccaagccctctcaaactctggcagtgtcattaaaccgatggctgttatcaat
gatcttcgacgaatagcaaaacatttccgttttggaaatcaggaagatgcacacgaattt
ctacgttacactgttgatgctatgcagaaagcatgtttaaatgggagcaccaaattggac
agacctacccaggctactacactcatccatcaaatatttggaggctatcttagatctaga
gtaaaatgttcaaactgcaaaggagtttctgatacctttgagccataccttgatattgca
ttggagataaagacggctcagagtgtaagcaaagctctagaattgtttgtgaagcctgaa
cagctagatggtgaaaattgttacaaatgtagcaggtgtaaaaagacagttcctgcttca
aaaaggtttacaatacatcgatcttctaatgtgctcaccatatctctgaaacgatttgca
aatttcagtggtggaaagatttcaaaggatgtaaaatattccgagttcttggatcttcgc
ccatttatgtcccagcaaaatggagaaccagttctttacaccctgtatgcagtcttagta
catactggttttagctgccacgcaggacactacttcgcctacataaagagctgtaatgca
cagtggtaccagatgaatgattccattgtagccatcactgatatcagaactgtcctgaat
cagcaagcttacatgcttttttatatcaggtcctctgatgtgaaaaatggagaactcatt
tattccattccaggacagtcttctccccgtccagctattagtcagcgggtagttaatagc
aagcaaaccgtatcaggatttattggaccacagcttcctccccacctgattaagacttct
ggccatttaaatggaactgggtcactaaaagaaactccaagcagttctgtggtatgtgct
agcaatgttaccctaaccaggccaaattcggcgcctccttcaacttccattcaaaactgg
acaattaaccgacccactattcctgatccttcaaaaaaacagaagattactatcagtatt
cacaacaaactgcctgctcgccaaagcctggcccaacccaatcttcataacaactctttg
gagagtctgagcaagcctgttccttcatccaccattactaattcctctgcagtacagtct
acctcaagtgcttctacaatgtcagttgctactaaagtacctaaacaattggctactagt
gaagcttgttctaaagcagtactgaatggcaagtctaagctaagctccagcacgttggtc
ccttatggtgcagaatcttcagaagaatctgatgaagattcaaaggcattagttaaggag
aatggacacaagaaacctgtaaatggaattttgattggaagtgtagctagttcattgcag
aattcctgttcttcctatcaagatgctgaaaaggaggtaccccagcatgaactgccaaaa
actgacagagtcaatggtgacaaagtcaatggtgctatttgtctagataataattctaaa
gacaatggtttgaaacttgatgattccacttgccaaaccaaggctcttaaaactacagag
actttctttcctaaaatgaatggattgcatggaaaaatgtgtgcaactttgccttcagtc
cctgaagataaaatcttagaatcattcaaattcagccaggtgaaaacttcatcagaggat
ataagtataactggaactgaaaaaaccgatcacagtattcccaacgattgctgcaacagc
cagggtccctttgctgcatcagctcctgagaccatttctaccaaagaaggactgccttct
aaattttctattttcttggttttgggggtgggtttcttcagacattaccaggattcagat
gcatctatgaccctttccgatgctgagatttacaaacataagaaaaagaagaaaaagaag
aaaaagcatgcaaagagatctgagggcttctttgaacatgcagatcctcatgctcagaag
cagggcaactctgagatgaacaggacatgggagaagaaagaggactccgatcttacagat
gacactccagttgaggagcatggacgacatgggtacgaacgtttacatgaagaggatgca
aattcttctcttaaaaagaaatgcttagaaggaggcaaggaaaatagttatcctgtatct
agagaggatagtaaagctaccatcctaccttctcataaggaccatggacagacagctatt
aaatctttggatggcacctttgcatacgccgatgaaactagatggaaagtgagtggaaag
ctgtccttgcaggaaaaactcgctagccacagattctga
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