Alligator mississippiensis (American alligator): 102559911
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Entry
102559911 CDS
T03087
Symbol
CHRNA5
Name
(RefSeq) cholinergic receptor nicotinic alpha 5 subunit
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102559911 (CHRNA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amj04040
]
102559911 (CHRNA5)
Ion channels [BR:
amj04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
102559911 (CHRNA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
102559911
NCBI-ProteinID:
XP_006261415
LinkDB
All DBs
Position
Un
AA seq
470 aa
AA seq
DB search
MAERAARTCRGGPGPLLVLSCLCAPLLGEPGRSAPSAGISEPSFIAKSEDHLFKHLFQDY
QRWVRPVERLNDTIKIKFGLAISQLVDVDEKNQLMTTNVWLKQEWIDVKLRWNPEDYAGI
TSIRVPSDSIWIPDIVLYDNADGRFEGTSTKTVVKYDGTIAWTPPANYKSSCTIDVTFFP
FDLQNCSMKFGSWTYDGSQVDIILEDYDVDKRDFFDNGEWEIVTATGSKGNRTDGCCWYP
FITYSFIIRRLPLFYTLFLIIPCIGLSFLTILVFYLPSNEGEKISLCTSVLVSLTVFLLV
IEEIIPSSSKVIPLIGEYLVFTMIFVTLSIVITVFAINIHHRSSSTHNAMAPWVRKIFLH
KLPKLLCMRSHVDRYFAQKEESSNISGSESSRNTLEAALDSIRYITRHVMKENEVREVVE
DWKFIAQVLDRMFLWTFLLVSIIGSLVLFIPVIHKWANIIVPVHIGSTNT
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgggcagcgcggacgtgccgcggtggccccgggcccctgctcgtgctcagc
tgcctgtgtgcgcccctgctcggggagcccggccgcagcgccccgtcggcgggtatatca
gaaccttcctttattgcaaaaagtgaagatcacttatttaagcacttgtttcaagactat
cagagatgggttcgcccagtggaacgcttgaatgacacaataaaaataaagtttggtctt
gcaatctcccagttagtggatgtggatgagaaaaatcagttgatgacgacaaatgtctgg
ttgaaacaggaatggatagatgtaaaattaaggtggaatcctgaagactatgctggaata
acatctattcgtgtcccatcagattccatttggatcccagacattgtgttgtatgacaat
gcagatggccgttttgaaggaacttctacaaaaacagtagtaaaatatgatggcaccatt
gcttggactccaccagcaaactacaaaagttcctgtactattgatgttaccttctttcca
tttgacctccaaaactgctctatgaaatttggttcctggacttatgatggctcacaggtt
gatataattctagaagattatgatgttgacaagagagatttttttgataatggagaatgg
gaaatagtaactgcaacaggaagcaaagggaacagaaccgatggatgctgctggtatcca
tttattacttattcatttataatcagacgtttgcctcttttctacacattgtttctcatt
attccctgtataggactttcatttttaactatccttgtcttctatcttccttcaaatgaa
ggtgaaaaaatctctctctgtacttcggtactagtatctttgactgtcttccttcttgtc
atagaagagattattccatcatcttctaaagttataccacttattggagaatatttggtg
tttactatgatttttgtgacactgtccattgtgataactgtctttgctattaacattcat
catcgttcctcctctacacacaatgctatggcaccatgggtccgcaagatatttcttcat
aaacttccaaaactactttgcatgagaagtcatgtagataggtattttgctcagaaagaa
gaaagtagcaatatcagtggatcagaatcatccaggaataccttggaagcagctctagat
tccatccgatacattacaagacatgtcatgaaggagaatgaagttcgtgaggtggttgaa
gactggaaatttatagctcaggtgcttgatcgaatgtttttatggacttttcttctggtt
tcaataattggatcgcttgtgttatttattcctgttattcataaatgggcaaatataatt
gtaccagtccatataggaagtacaaatacataa
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