Alligator mississippiensis (American alligator): 102560008
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Entry
102560008 CDS
T03087
Symbol
COLEC11
Name
(RefSeq) collectin subfamily member 11
KO
K10066
collectin sub-family member 11
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102560008 (COLEC11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102560008 (COLEC11)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
amj04091
]
102560008 (COLEC11)
Membrane trafficking [BR:
amj04131
]
Endocytosis
Phagocytosis
Opsonins
102560008 (COLEC11)
Lectins [BR:
amj04091
]
C-Type lectins
Collectins
102560008 (COLEC11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lectin_C
Collagen
Motif
Other DBs
NCBI-GeneID:
102560008
NCBI-ProteinID:
XP_006265576
LinkDB
All DBs
Position
Un
AA seq
271 aa
AA seq
DB search
MKRDLVFLATLISFAFLSLLRSGYPQHIAEESCSVQILVPGLKGEAGEKGEKGAPGRPGR
VGPSGEKGEIGDKGQKGSMGRHGKIGPIGSKGAKGDNGDIGPPGPNGDPGIPCECSQLRK
AIGEMDIQVAQLTTELKFIKNAVAGVRETDNKIYLLVKEEKRYMEAQLYCHGRGGTLSMP
KDETTNGLIASYITQAGLIRVFIGINDLEKEGNFVYADRSPMQTFNKWRSGEPNNAYDEE
DCVEMVASGGWNDVACHITMYFVCEFDKENV
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgaagagagatctggttttcttggcgactctaattagctttgccttcctgtcactgcta
agatctggatatcctcaacacattgcagaagagtcctgctctgttcagattcttgttcca
ggcctcaaaggggaggctggagaaaagggagaaaaaggtgctccagggaggccaggaaga
gttggaccttcaggagaaaaaggagagatcggggacaaaggacagaagggcagcatgggc
cgacatggaaaaattggtcccattggttcaaaaggtgcaaaaggtgataatggtgacata
gggccgcctggtcctaatggagacccaggcatcccctgtgaatgcagtcagctaaggaag
gctattggtgagatggatatccaagtggcccagttgacaactgaattaaaattcataaaa
aatgctgttgctggtgtgcgagagacggataataagatatacctactggtgaaagaagag
aaaaggtacatggaagcccagctgtactgccatggaagaggaggaacactgagcatgccc
aaggatgagactaccaatggtctgattgcttcatacatcactcaagcagggctcatcaga
gtattcattgggattaatgaccttgaaaaagagggaaattttgtgtatgctgatcgatca
cccatgcagaccttcaacaagtggcgcagtggtgagcccaataatgcttatgatgaggag
gactgcgtggaaatggtggcttccggtggatggaacgatgttgcctgtcatattacaatg
tattttgtttgtgaatttgacaaagaaaatgtctga
DBGET
integrated database retrieval system
