Alligator mississippiensis (American alligator): 102560023
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Entry
102560023 CDS
T03087
Symbol
LRRC4B
Name
(RefSeq) leucine rich repeat containing 4B
KO
K16360
netrin-G3 ligand
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102560023 (LRRC4B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
amj04515
]
102560023 (LRRC4B)
Cell adhesion molecules [BR:
amj04515
]
Immunoglobulin superfamily
NGL family
102560023 (LRRC4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_14
LRR_1
LRR_9
ig
V-set
Ig_2
LRRNT
LRR_At5g56370
LRR_EndoS
DUF7617
LRR_RPS2
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
102560023
NCBI-ProteinID:
XP_006268895
LinkDB
All DBs
Position
Un
AA seq
643 aa
AA seq
DB search
MAAPRCCSQRGPLAPSACRMLWKQGLLLALWLPSLALAGTSPTSCPAACSCSNQASRVIC
TRRELVEVPESISINTRYLNLQENNIQVIKTDTFKHLRHLEILQLSKNLIRKIEVGAFNG
LPNLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGEL
KKLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDMIRPGSFQGL
TSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNP
WHCNCDVLWLSWWLKETVPNNTTCCARCHAPPSLKGRYIGELDQSHFTCYAPVIVEPPTD
LNVTEGMAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTG
QYTCMVTNSAGNTTASATLNVSAVDPATTGYTYFTTVTVETMETTQEDTVPTKKEPGPTP
SWEMTYSTTSLTPRSTRSTEKPFTVPITVVTENGMKDLDDVMKTTKIIIGCFVAITFMAA
VMLIVFYKLRKQHQLHKHHGPTRTIEIINVEDELPAAAGAPGDSHLALPALEHDHLNHYT
AFKTHYNNNAGALNCSKNPLLNSIHEPLLFKSSSKENVQETQI
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggctgccccccgctgctgctcccagagggggccgctggctcccagtgcctgtaggatg
ctttggaagcagggcttgctgctggcactgtggctgccctcgctggcactggctgggacc
tcgcccacctcgtgcccagctgcctgctcctgcagcaaccaggccagccgtgtcatctgc
acacgccgggagctggtcgaggtgccggagagcatctccatcaacacacggtacctcaac
cttcaggagaacaacatccaggttatcaagactgacaccttcaagcatctgcggcacctg
gagatcctgcagctgagtaagaacctgatccgtaagatcgaggtgggcgccttcaatggg
ctgcccaacctcaacaccctggagctgtttgacaaccgtctgaccacggtacccacacag
gcctttgagtacctctccaagctgcgggagctctggctgcgcaacaatcccattgagagc
atcccatcctacgccttcaaccgtgtgccctcgctgcgtcgcctggacctgggtgagctc
aagaagctggagtacatttcagaggcggccttcgaggggctggtgaacctgcgctacctg
aacttgggcatgtgcaacctcaaggacatccccaacctgacggcgctggtgcgcctggaa
gagctggagctctcggggaaccggttggacatgattcgcccgggctccttccaaggcctc
accagcctgcgcaagctgtggctcatgcatgcccaggtggccaccattgaacgcaatgcc
ttcgatgacctcaagtcgctggaggagctcaacctgtcccacaacaacctcatgtcgctg
ccccatgacctcttcacccccctgcaccggctggagcgggtgcacctcaatcacaacccc
tggcactgcaactgcgatgtattgtggctcagctggtggctgaaggagacggtgcccaac
aacaccacctgctgtgcccgctgccatgccccacccagcctcaaggggcgctacattggc
gagctggaccagagccacttcacctgctatgcccctgtcatcgtggagccgcccactgac
ctcaatgtgacggaaggcatggcggctgagctgaagtgccggacgggcacctccatgacc
tcagtcaactggctgacgcccaatgggacactgatgacacacggctcataccgggtacgg
atctcagtgctgcatgatgggaccctcaacttcaccaatgtgacagtgcaggacacgggt
caatacacctgcatggtgaccaactcggctggcaacaccaccgcctcagccacactgaat
gtctcagctgtggacccagccaccactggctacacttacttcaccacggtgacagtggag
accatggagacaacgcaggaggacactgtgccaaccaaaaaggagccaggccccacgccc
agctgggagatgacctactccaccacctcgctgacaccccgctccacccgctccacggag
aagcctttcaccgtgcccatcaccgtggtgactgagaatggcatgaaggacctggacgat
gtgatgaagacgaccaagatcatcattgggtgcttcgtggccatcactttcatggcggcc
gtgatgcttatcgtcttctacaagctacgcaagcagcaccagctccacaagcaccatggc
cccactcgcaccattgaaatcatcaatgtggaggacgagctgccagctgctgctggtgcc
cccggtgacagccacctggctttgccagccctggagcacgaccacctcaaccactacacg
gccttcaaaacccactacaataacaatgccggtgccctgaactgttctaagaaccccctg
ctgaactccatccacgaacctctgctgttcaagagcagctcaaaggaaaacgtgcaagag
acgcagatctga
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