Alligator mississippiensis (American alligator): 102560087
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Entry
102560087 CDS
T03087
Symbol
PDZRN3
Name
(RefSeq) PDZ domain containing ring finger 3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amj04121
]
102560087 (PDZRN3)
Enzymes [BR:
amj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102560087 (PDZRN3)
Ubiquitin system [BR:
amj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
102560087 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
102560087
NCBI-ProteinID:
XP_014460759
LinkDB
All DBs
Position
Un
AA seq
857 aa
AA seq
DB search
MDCEKKEREDNCKNLLDRITFMKSNIEQLRFSANGEETKALTLVLHRDSGSLGFNIIGGR
PCMDNQDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGKDLSKATHEQAVEAFKTA
KEPIVVQVLRRTPRTKIFSSSHESQLVDMGTQTDITFEHIMALTKMGSPTPPVSVLDPYL
LPEDHSSVHEFYDPNDYMGGIHQEMDREELELEEVDLHRANSQDKLGLTVCYRTDDEDDI
GIYVSEIDPNSIAAKDGRLREGDRIIQINGIEVQNREEAVALLTSEESKNVSLLVARPEI
QLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTASILQQKKHDEDGGTTDTATILSNQH
EKDSGVGRTDDSTRNDESSEQENNADDHTTSSNTLGSQKKLPYSHDTLGSGDMPFSNESF
ISADCTDADFLGIPVDECERFRELLELKCQVKSGNPYSLYYHNSALDMSKSDQESVDREL
EMLNEELRNIELECLNIVRAHKMQQLKEQYREPWMLHNSGFRNYNTSIDLRRHELSDITE
LPEKSDKDSSSAYNTGESCRSTPLTLEISPDNSLRRIAEGTNCQGSEGATAYNAAQKNLL
PSSESHESSAAKYHSSPKDPDLDKQLESKDRKNSDGSKSPTHSQKPGGSYISPYHHSPYK
HAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSMCKDLNSSSQSEPRMEWKVKVRSDG
TRYITKRPVRDRLLRERAIKIKEERSGMTTDDDAISEMKMGRYWSKEERKQHLVKAKEQR
RRREFMMQSRLDCLKEQQGAEEKKEMNIIELSHKKMMKKRNKKIFDNWMTIQELLTHGTK
SPDGTRVYNSFLSVTTV
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggactgtgaaaaaaaggagagagaggacaattgtaaaaatcttttggacaggattact
tttatgaaaagcaatatcgagcagttacgcttttctgcaaatggtgaagaaactaaagca
ctgaccctcgtccttcatcgtgactctggatctcttggatttaatattattggtggccga
ccgtgtatggacaatcaagacggctcctccagcgaaggaatttttgtatcaaaaatagtc
gacagtgggcccgctgctaaagaaggagggctgcaaattcacgacaggattattgaggtg
aacggaaaggatttatccaaagcaacgcacgagcaggcagtggaagccttcaaaacggcg
aaggagcccatcgtggtacaggtcctgaggagaacgccacgcaccaagatcttcagctct
tctcatgagtctcagctggtcgacatgggcactcagactgatatcacctttgaacacatc
atggctctcaccaagatgggatcccctactccaccagtctcggtgttagatccatacctc
ttaccagaagaccattcatcagtgcatgaattctacgacccgaatgactacatgggaggc
attcatcaagaaatggacagagaggagttggaattagaggaggtggacttgcatcgagcg
aacagccaggacaagctcggccttactgtctgttataggaccgatgacgaagatgacatt
ggtatttatgtaagcgagatcgatcccaacagtattgctgcaaaagatggtcgtctacga
gagggagatcgcattattcaaattaatggcatagaagtacagaaccgagaggaagctgtg
gcactcctcaccagtgaagaaagcaagaatgtctccttacttgtagcaaggccagaaatt
cagctggatgaaggctggatggatgatgacagaaatgattttctggatgacttgcacatg
gacatgctagaggaacagcaccaccaagcaatgcaatttactgccagcatacttcagcag
aagaagcacgacgaagatggaggtaccacggacactgcaacgattttatccaaccagcac
gagaaggacagcggtgtgggacgtacagatgacagcactcgcaatgacgagagctcagag
caagagaacaacgccgacgatcacacaacttcctctaacactttagggagccagaagaag
ctgccgtacagtcacgacacgcttggaagcggcgatatgccattcagcaacgaatcgttt
atctcggctgattgcacagacgccgatttccttggcatcccggtagatgagtgcgagagg
ttccgggaactactggaactcaagtgtcaagtcaagtctggcaacccctacagcctctat
tatcacaacagtgccctggatatgagcaaaagcgaccaagagagcgtcgacagagagctg
gagatgctgaacgaggagctgcggaacatcgagttggagtgtctgaacatcgtgagagct
cataaaatgcaacagctgaaagagcaataccgagagccctggatgctccataacagcggg
ttccgcaactacaacacgagcatcgacctgcgcagacacgagctctccgacattacagag
ctcccggagaaatccgacaaggatagctcgagtgcgtataacactggggaaagctgccga
agtacaccgctcacactagagatttctcctgacaattcactgcgcagaattgcagaagga
accaattgccaaggcagcgagggggcaactgcatacaatgccgcccagaagaatttgcta
cctagctcagaaagtcatgaatccagcgctgctaagtatcactcgtctcctaaagatcct
gaccttgacaagcagctggaaagcaaggacagaaaaaacagcgatggaagcaaaagccca
actcactctcaaaaaccaggtggctcctacatctccccgtatcatcactctccgtacaag
catgctcatatccctgcccatgcacagcactatcagagctacatgcagctgattcaacag
aaatcagctgtggaatatgcacagagccaaatgagcctggtcagcatgtgcaaagacttg
aattcgtcaagccagagcgagcccaggatggaatggaaagtcaaggtcaggagcgatggg
acccgctacattacgaagaggccggtcagggacagactgctgagagagcgtgccatcaag
attaaggaagagcgcagcggtatgactacggatgacgatgcgataagtgaaatgaagatg
ggccgttactggagcaaggaggaacggaagcagcatttggtgaaagcgaaggagcagagg
cgaaggcgagagttcatgatgcagagcaggttggattgtttaaaggaacagcaaggtgca
gaagagaagaaggaaatgaatatcattgaactgagccacaaaaaaatgatgaagaaaaga
aataaaaagatatttgacaactggatgacaatccaagaactgttaacccatggcacaaag
tcacccgacggcacaagagtgtacaattccttcctgtcagtgactactgtataa
DBGET
integrated database retrieval system
