KEGG   Alligator mississippiensis (American alligator): 102560268
Entry
102560268         CDS       T03087                                 
Symbol
CFAP43, WDR96
Name
(RefSeq) cilia and flagella associated protein 43
  KO
K24223  cilia- and flagella-associated protein 43
Organism
amj  Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:amj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:amj03037]
    102560268 (CFAP43)
Cilium and associated proteins [BR:amj03037]
 Motile cilia and associated proteins
  Tether/Tether head (T/TH) complex
   102560268 (CFAP43)
SSDB
Motif
Pfam: CC_Cfap43 Beta-prop_EML_2 Beta-prop_THOC3 WD40_WDHD1_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR5 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_1st Beta-prop_EML Beta-prop_WDR3_2nd WDR55 Beta-prop_VPS8 CFAP43_N Beta-prop_RIG_2nd Beta-prop_ACSF4 Beta-prop_HPS5 Beta-prop_WDR36-Utp21_2nd WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 102560268
NCBI-ProteinID: XP_019341533
LinkDB
Position
Un
AA seq 1692 aa
MEPSGADEADRLLTAAAARVEVRWVQGFPSRNVGFVNHETICYPCGNYILFVDLETKKKT
VLPCPSGRVGAFAVNGASGVVAFSDQKLNPVIYIYTFPGLINWRELKGQAQLDYTLLAFS
YMGPYLASYSSVPEFALSVWNWQENVLLCSKSQLGMTATSLSFNPLSWHQLCMSSESSIT
IWNIERSDEEHHLKPKPVQLPAEDASQIFNQNPFFSHPDTQDAYYGPVLPNSAIAGLIRD
EALLFRPKDDIQPSVHPTVHCWSATSDLYVGCEEGCILVINSETLETSLLHQKFPTERRQ
TIVQISPMISEASLKKEGQEEGLAQSVVLAMAFHKNGLYAAGSDGVVHMCQPKDSFYTMK
NYLDVSEPITSLVFSPDYSRLLVETEKGSVYIYKPTSSEEAVKLLDASSSHFLSADFLTP
GNKYCVSVAISGEVHFWLLEDGTCISKLSLNKQATALVCCPSSHTVAVGTKTGHVHFIDA
TKVNTPRVVHRVLLTHFPVLCLNYDEGGQYLIAGAAEGHIFILDARPSKLFQVLGYLVLS
SEVLGLSTVYDKDTELVEVMALLCPADIRRARLEIFCLPSTLTIDNDECVDERGLLKENI
IQKQQYELDYPLSSAVRQKDGTIYGYCSHAPFICKYNLASKKILKDPTVVFSEERIQSNQ
SGRGFLSLSPNNRWLASVAEDGVLFIRDAATLETFAQAHCHSYQGGGIRSLAFSKDGQSM
LINGVEDGALVCLKWKMAGDDDIKEADEYWQSTLAVLNNSIYSENNVLKSMRDWHVASKS
ILPSSSEKGHKEKLQRQPSVELTDEDESFINSVSIGEMTWMKQKIQKAIEEETKKFADKK
KELKKGIKSLRKTIQEMMHENEQVPEIEKLDQQEFNLDAEEQERLQLESEQEVARVRKEI
EMENLANCYLRDVLKQQCWDSMSVKGRAIKCFHAAYEVKNYPMKERGKEELETLEKVLQL
KKIECADLKIRKEIIEFQLPTVSSKEEGEKVEEDVVADETTPIALIGSLSSQYGGDTAVL
YPQMDLHTREQKINQIILLQDIIYRVKTAFNKAFDIVARQKEQEIARVKERNLRIQEILT
QLDLQEEVWEPTLTDDEIPERVLTVQDSEIKVEKYLTPQQRAKAEMMAKLEMQRRLAAQD
NARQRALNDMMDGVLEVKKEDILKMEIPPPPFISKPDTLWSEEEKKIFKEYEKKVKELNE
ERDKHRKILETELKKLQTAIQETTQSFDDTVCKLFEKKVKSEMVICQEELKINSLLYSLL
LDEELSTREAGLHYFLEKKRKEKLSTAEAVQIARRQVDAYRETYDNLVAEDKILERGFRK
EFSDVPMHLIDQLFKLYKRRPRAQKMKMHLDTANPYGDRPGSAKAYKDALDHLMRAMNEL
DNPENMPEGLDLPVWERFCSARRTKVESEQLVKRKALTLAEMQAFLQRRIEDDEKIKKDI
DNIFSEVNLLQEQKMRFQLDLTVQFLLKQGQVELESSELIPDYTDAILINKSVIEELNCT
IRAQGEKKIASMVECKDFSKGIFQLEWEHKKMKMQMEDLNQKARDIQTLRVSKDRQLFLN
VLNYDSRVNHQVSVLEQTLGVMDKLHKEKVKKCQKIIKDLEKRISLKEQANYKLSLELQE
MLVSVSERRHIFEAADTQPASEKIAKEHYQDIVQRRRLVDLAKGQAQEIAILQAEVARLR
MKTFPALYEVEY
NT seq 5079 nt   +upstreamnt  +downstreamnt
atggagccgagcggcgcggacgaggcggaccggctcctcacagccgcggcggcgcgtgtg
gaagtgagatgggttcagggattcccgagcaggaacgtgggtttcgtcaaccacgagacc
atctgctacccctgcggcaattacatcctttttgttgacctcgaaaccaagaagaagacg
gtgctgccgtgtccgagcggccgcgtgggagccttcgccgtgaacggagccagcggagtg
gtggctttctccgaccagaagctcaaccccgtcatttatatctacacttttccagggctg
attaactggagggaattaaaaggtcaagctcagctagactacaccttactcgcgttcagt
tacatgggtccttacctggccagttattcgtcagttccagaatttgccctttcagtctgg
aactggcaagaaaatgttcttctgtgcagcaaatctcagttgggtatgacagcaacctcc
ttgagctttaatcctctgagctggcaccaactgtgtatgtccagtgagagttccatcact
atctggaacattgaaaggagcgatgaagagcatcatctcaagccaaagcctgtgcaactt
cctgctgaagatgcgtcacagatctttaatcagaatccctttttttcacatcctgatacc
caagatgcgtactatggccctgtactgccaaattctgctattgctgggctaatcagggat
gaagcactgctattcaggccaaaagatgacatccagccttcagtgcaccctactgtccac
tgctggagtgcaacctctgacctgtatgtgggctgtgaagagggatgtattttggtgatt
aattctgagacactggaaacttctcttcttcatcagaaatttccaactgaacgaaggcaa
acaattgttcagatctcaccaatgatatctgaagcaagtttgaaaaaggaaggtcaagag
gagggcttggcgcagtctgttgtgctcgctatggcttttcataaaaatggactgtatgca
gcaggaagtgatggcgttgtgcatatgtgccagcccaaagactcattctataccatgaaa
aactaccttgatgtatcggaacctataaccagccttgttttctcccctgattactccaga
ttgctagtagaaacagaaaagggatcagtgtatatttataaacctacttccagtgaggaa
gctgtcaagctcttggatgcgtccagcagtcatttcctgtcagctgattttcttactcca
ggaaacaaatactgcgtgtctgtagcaatttcaggggaagtgcacttttggttgttggag
gatggaacctgcatcagcaagctaagcctcaataaacaggcaactgctttggtttgctgc
ccctcctcacacactgttgctgtaggcaccaaaacgggtcatgtccatttcattgatgct
accaaagtaaacaccccacgggtggttcaccgagttcttcttacccactttcctgtgctc
tgtttgaattatgatgagggtggtcaatatctcattgctggagctgcagaaggacatatc
tttattttagacgcccggccctcaaaattatttcaggttcttggatacctagtgttgagc
agtgaagtccttggcctttctacagtttatgataaggacactgaattagttgaggtgatg
gcacttctttgtcctgcagatatcagaagagcaagactggaaatcttttgtctgccatca
acactcacaatagataatgatgagtgtgttgatgaaagaggcctgctaaaagagaacatc
attcagaagcagcagtacgaactggattacccactgagctcggcagtcaggcagaaggat
ggcaccatatatggctactgtagccatgcacctttcatctgtaaatacaatcttgccagc
aagaaaatcttgaaagacccaacagttgttttctcggaggaaaggatacaaagcaatcag
tctggacgagggttcctctctttgtcgcccaacaaccggtggttggcctcagtggcggag
gatggagttttgtttatccgtgatgctgctactttggaaacatttgctcaggcacattgc
cattcatatcagggaggtggaatcagatccttggcattttcaaaggatggtcagtccatg
ctcatcaatggtgtagaggacggtgcccttgtgtgtctgaaatggaagatggctggagac
gatgacattaaggaagctgatgagtattggcaatccactcttgctgttctgaacaactcc
atatacagtgaaaataatgttctaaaatctatgagagactggcatgttgcttcaaaatcc
attctgccgtcatcctctgaaaagggacacaaggaaaaactgcagagacaaccaagtgtg
gagttgacagatgaagatgaaagcttcattaactcagtcagcatcggtgaaatgacatgg
atgaaacagaaaatacagaaggctatcgaagaagagaccaagaagtttgctgacaagaaa
aaagagctgaaaaaaggaattaaaagccttcgtaaaactattcaggaaatgatgcatgaa
aatgaacaagtgcctgagattgagaaactagatcagcaggagttcaatctggatgcagaa
gaacaagaaaggctgcaactggagagtgaacaggaagtggccagggtaaggaaggagatt
gagatggagaatcttgccaactgctatttgcgtgatgttctcaagcagcagtgctgggac
tccatgtctgtcaaaggacgtgcaattaagtgcttccatgcagcttatgaggtaaagaat
tatcctatgaaggaacgtggtaaagaagagctggagactttggagaaggtcctgcagtta
aagaagattgagtgtgctgatcttaagattcggaaggagattattgagtttcagcttcca
acagtatcatcaaaagaggaaggagagaaagtagaagaagacgtggtggctgatgagacc
acacccattgccttgatagggagcctgagtagtcagtatggtggagatacagctgtcctg
tatccccaaatggatctgcacacccgagagcagaagattaatcagataattttactgcag
gacatcatttacagagtgaaaactgcctttaacaaggcatttgacatagtggctcgacag
aaggagcaggagatagcaagggtcaaggaaaggaacctgaggatccaggaaatcttaaca
cagcttgatctccaagaggaagtctgggaaccgactcttacggatgatgagataccagag
cgtgtgctcactgtccaggattcggagattaaagtggaaaaatacctaaccccacagcag
agagcaaaagcagaaatgatggctaagcttgaaatgcaaaggcgtcttgctgctcaggac
aatgcaagacagcgtgctcttaatgacatgatggacggggtcctagaggtcaaaaaggaa
gacatcttgaaaatggagatacccccacctccttttatatccaaacccgacaccctttgg
agtgaagaagaaaagaaaatatttaaggaatatgagaaaaaagtcaaggagctgaatgaa
gaaagagataagcatagaaagatactagaaactgaactgaagaaactgcaaacagcaatt
caggaaacaacgcaaagttttgatgacactgtatgcaagctcttcgagaagaaggtgaag
tcggagatggtcatatgccaggaagaactcaaaataaacagcctcctttattcattactc
ctggatgaagagctgagcaccagagaagctggactgcattactttcttgagaagaagcgg
aaagagaagctcagtactgcagaggcagtccagattgcaagaagacaggttgatgcttac
agagagacctatgacaatttggtagctgaagacaagattctggaacgtggctttagaaaa
gaattttctgatgttcctatgcatcttatagatcagcttttcaaactttacaaacgtcga
ccaagagcccagaagatgaagatgcaccttgacactgctaacccttacggggacagacca
ggctcagccaaagcttacaaagatgcacttgaccatttaatgagagccatgaatgaactg
gataaccctgagaacatgcctgagggtttagacttgcctgtttgggaacgtttctgttcc
gctcggcgaacaaaagtagagagcgaacagctggtgaaacggaaagccttgacgctagcg
gagatgcaggcttttctccagagaagaatagaggatgatgagaagataaagaaggacatt
gacaacatcttcagtgaagtcaacctgttacaggaacagaagatgaggtttcaattggat
ttgactgtccaatttctgcttaaacaaggacaggtggaattggaaagcagtgagctaata
ccagattacactgatgctattctcattaataagagtgttattgaagaactgaattgcact
atccgggctcaaggagaaaagaaaattgctagtatggtggaatgtaaagacttctctaaa
gggatatttcaactggaatgggaacataagaaaatgaagatgcagatggaagatctaaac
cagaaggctcgagatattcaaaccctgcgtgtgtcaaaagatcgtcagcttttcctaaat
gtactaaactacgacagccgtgtgaaccaccaggtatcggtgctggagcagacccttggc
gttatggataagctgcacaaggagaaagtgaagaaatgtcagaaaataattaaggacctg
gagaagcgcatcagtctgaaggagcaagcaaactacaaactcagcctggagctgcaagaa
atgctcgtgtctgtctcagaaaggcggcatatctttgaggcagctgacacacaaccagct
tctgaaaagattgctaaggagcattaccaggatattgtgcagcgacgacgactagtggat
cttgcaaagggacaggcccaagagattgcaattcttcaggcagaagttgcaaggctgaga
atgaaaacgttccctgccctttatgaagtagagtattag

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