Alligator mississippiensis (American alligator): 102560367
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Entry
102560367 CDS
T03087
Symbol
SORT1
Name
(RefSeq) sortilin 1
KO
K12388
sortilin
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
102560367 (SORT1)
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Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
BNR
Mo-co_dimer
Motif
Other DBs
NCBI-GeneID:
102560367
NCBI-ProteinID:
XP_019348063
UniProt:
A0A151N8R1
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All DBs
Position
Un
AA seq
773 aa
AA seq
DB search
MGLRAAALSGLVLLLLSPLSRPARLPECGDLRDVQGALVNNTHKCVFDDLSGSVSLSWVG
DSTGVILVLTTFQVPLVIVSFGQSKLYRSEDYGKKFKDITHLINNTFIRTEFGIAIGPEN
SGKVILTGDVSGGSHGGKIFRSSDFAKNFVETDLPFHPLTQITYHPQNSDYLLALSTENG
LWVSKNFGESWEELHKAVCLAKWGANTTIFFTTYLNGSCKADLGLLELKKTSDFGKVFKT
IGTRIYSFGLGGRFLFASVMTEKGGTRRIHVSLDQGETWNMAQLPSVGQEQFYSILAAND
DMVFMHVDERGETGYGTIYTSDDRGIVYSKSLERHLYTTTGGETDFINVTSLRGIYITSV
LSEDNSIQSVITFDRGGEWVPLRKPQNTTCDSTAKNKEECSLHIHASYSISQKLNVPMVP
LSEPNAVGIIIAHGSVGDAISVVSPDVYISDDGGYTWARMLEGPHHYAILDSGGIIVAIE
HSSQPINVIKFSTDEGQCWYKYTFSKEPIFFTGLASEPGAKSMNVSVWGFRGSFLSRKWV
SYTIDFADLLVRSCEDKDYTIWLAHSSNPTNPTDGCILGYKEEYRRLRKSSVCQNGRDYM
VTKQPSVCLCTLEDFLCDFGYFRPENQSNCVEQPELKGHDLEFCLYGRRELLKTSGYRKI
PGDKCDGGQSPPREVTDLKRKCTSNFLSPSQLSASSSSTPIILAVIGVILIAIVAGVVII
KKYVCGGRFLVHRYSVLQQHADANGVEGVDTLDSVTSANKSGYHDDSDEDLLE
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggggctgcgggcggctgcgctgagcggcctcgtcctgctgctgctgtcgccgctctcc
cgcccggcccggctgcccgagtgcggcgacctgcgcgatgtccagggcgccctggtcaac
aacacgcacaagtgtgtctttgacgatctcagcggctcagtatcgctctcctgggttggg
gacagcactggagtgattcttgtcctgaccacgttccaggtgcctctggtgattgtgagt
ttcgggcagtccaagctctacaggagtgaggactatggaaaaaagttcaaggacatcacg
cacctcattaacaacacattcatccggacagagtttgggatagccattggaccagaaaat
tcgggcaaggtgattctgacaggggacgtgtctggtgggagccacggagggaagatcttt
agatcatctgattttgccaagaactttgtcgagacagatctccctttccacccgctgact
caaatcacctaccacccccagaactcggattacctgctagccctcagcactgaaaatggc
ctctgggtatcaaagaactttggggaaagctgggaagaactccacaaagctgtttgtctg
gcaaaatggggagctaacaccaccatcttcttcaccacctacctgaatggctcctgcaaa
gctgacctcgggttactggagctgaagaaaacatctgattttggcaaggttttcaaaacc
attggaacaaggatctactccttcgggctggggggccgcttcctctttgcttctgtgatg
acagagaagggtggtacaaggaggattcatgtctcgcttgaccaaggcgagacctggaat
atggcccagctaccctcggtgggccaggagcagttctactccatcctggcagctaacgat
gatatggtctttatgcatgtggatgagcgtggagagactggctacggcacaatctatacc
tcagacgatcggggcatcgtgtattccaagtccctcgagcggcatctctacacaaccact
ggaggggaaacagacttcatcaacgtgacctcactgcgcggcatctacatcaccagcgtg
ctctcggaggacaattccatccagtcagtgatcacgtttgatcgtggcggcgagtgggtg
cccctgcggaagcctcagaacaccacctgcgactccactgcaaagaacaaagaggagtgc
agccttcacatccacgcttcctacagcatctcccagaaactgaatgtgcccatggtaccg
ctctctgaaccaaatgctgttggcataatcatcgctcatggcagcgtgggagatgccatc
tccgtggtgagcccggacgtttacatatcggatgacgggggctatacctgggcccgcatg
ctggagggaccccatcactatgccatcctggactctgggggcatcatcgttgccattgag
catagcagccagccgatcaatgtgattaagttctccacagatgaagggcaatgctggtac
aagtacacattctccaaggagcccatcttcttcactggactagcatctgaaccaggagcc
aagtctatgaatgtcagtgtctggggcttcagagggagcttcctgtctcgcaaatgggtc
tcctataccattgatttcgctgacctccttgtcaggagctgtgaggacaaggattacacc
atttggctagctcactccagcaaccccactaaccccactgatggctgcatcctgggttac
aaagaggaataccggcggctccgcaagtcatcggtctgtcagaacggccgggactacatg
gtgaccaagcagccatcagtctgtctctgcacgctggaagacttcctctgtgatttcggc
tacttccgcccagaaaaccagtccaactgcgtggagcaaccggagctgaagggccacgac
ctggagttctgcctctacgggaggcgggagctgctgaagaccagtgggtatcgtaaaata
ccaggagacaaatgtgatggtggacagagcccaccacgggaggtgactgacctgaagaga
aaatgcacaagcaactttttgagccccagccagctgtcagcctcttccagctccacaccc
atcattctggctgttataggtgtgattctcatcgcgattgtagctggagtcgtcatcatt
aagaaatatgtctgcgggggcaggttcctggttcaccgctattctgtcctgcagcagcat
gcagatgcaaatggcgtggaaggggtagatactctggactcggtcacctcagctaataaa
agcggttaccatgatgactccgacgaggacctcctggagtag
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