Alligator mississippiensis (American alligator): 102560490
Help
Entry
102560490 CDS
T03087
Symbol
DYNC1I2
Name
(RefSeq) dynein cytoplasmic 1 intermediate chain 2
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04145
Phagosome
amj04814
Motor proteins
amj05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102560490 (DYNC1I2)
09142 Cell motility
04814 Motor proteins
102560490 (DYNC1I2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102560490 (DYNC1I2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amj03036
]
102560490 (DYNC1I2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
amj04812
]
102560490 (DYNC1I2)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
102560490 (DYNC1I2)
Cytoskeleton proteins [BR:
amj04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
102560490 (DYNC1I2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_EML
WD40
Dynein_IC2
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
102560490
NCBI-ProteinID:
XP_006265963
LinkDB
All DBs
Position
Un
AA seq
629 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEVLPVQEESDLEKKRREAE
ALLQSMGLTPESPIVPPPMSPSSKSVSTPSEAGSQDSGDGAVGSRTLHWDTDPSVLQLHS
DSDLGRGPVKLGMAKITQVDFPPREIVTYTKETQTPVMTQPKEDEEEEDDVVIPKPSIEP
EEEKTLKKEEEEEVAPHELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFDYSG
RDLEDKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHEP
DGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRTP
VQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSQPQDSMELIHKQS
KAVAVTCMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHTAVG
PVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGMGRL
DLWNLNNDTEVPTASITVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVPRSD
EWTRFGRTLAEINANRADAEEEAATRIPA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaaagtgaattgaaagcagagttggagcgcaagaaacaacgcttggctcaa
atcagggaggagaaaaagagaaaagaggaagaaagaaagaaaaaagaaactgaccagaag
aaagaagttcttcctgtacaagaagaatctgaccttgaaaagaagagaagagaagctgaa
gcattgcttcaaagcatggggctaacaccagagtctcctatagtccctcctcctatgtct
ccatcttccaaatccgtgagtactccaagtgaggctggaagccaagactctggtgacggt
gctgttggatccaggacgctgcattgggatactgatccatcagttcttcagcttcactct
gattccgatctgggacgtggacctgttaaacttggaatggcaaaaattacacaagtagat
tttcctcctcgagaaattgttacatatacaaaggagactcaaacaccggttatgactcaa
cctaaggaagatgaggaagaggaagatgatgttgtgataccaaaaccatcaattgaaccc
gaagaagaaaaaacactgaaaaaagaggaagaggaggaagttgcacctcatgaacttaca
gaagaagaaaaacaacaaattttgcactctgaagaatttttaagtttttttgaccattct
acaaggattgtagaaagagctctttctgagcagattaacattttctttgactacagtgga
cgagacttggaagacaaagaaggagagattcaagcaggtgcaaaactgtctttaaatagg
cagttttttgatgaacgctggtcaaagcatcgtgttgttagttgtttggactggtcatct
cagtacccagagttgcttgtagcctcttataacaacaacgaagatgcccctcatgagcct
gatggggtggctcttgtttggaatatgaaatacaaaaaaactaccccggagtacgtcttt
cactgccagtctgcagtgatgtctgctacatttgcaaaatttcacccaaatctggtggtt
ggtggcacatattcaggacaaattgtgctttgggataatcgcagcaataagagaacgcca
gtacaaagaactccgctttcagctgctgctcacacgcatcctgtatactgcgtaaatgtg
gttgggactcagaatgctcacaacctgattagcatctcaactgatggaaagatatgctcg
tggagtctggatatgctttcccagccgcaggatagcatggagttaattcataagcagtcc
aaagctgtagctgtcacttgcatgtccttccctgttggagatgtcaacaactttgttgtt
ggaagtgaagaaggctccgtgtacacagcatgccgccatggcagcaaagctggaatcagt
gagatgtttgaaggacaccaaggaccaatcacaggcatccattgccatacagcggttgga
cctgttgacttctctcatctctttgtcacctcatcttttgactggacagtaaagctttgg
acaactaagaataataagcctctctactcatttgaggacaactcagactatgtgtatgat
gttatgtggtctcctactcaccctgccctgtttgcttgtgtggatggaatggggaggctt
gatctgtggaatctcaacaatgatactgaggtgccaactgcaagcattactgtggagggg
aatcctgctcttaatcgtgttagatggacacattctgggcgagagattgctgttggtgat
tcagaaggacagatagtcatatatgatgtgggagagcaaattgctgtccctcgcagcgat
gaatggactcgttttggtcggacattagcagaaataaatgcaaatagagctgatgcagag
gaagaagctgcaactcgcatacctgcataa
DBGET
integrated database retrieval system
