Alligator mississippiensis (American alligator): 102560576
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Entry
102560576 CDS
T03087
Symbol
YOD1
Name
(RefSeq) YOD1 deubiquitinase
KO
K13719
ubiquitin thioesterase OTU1 [EC:3.1.2.-]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102560576 (YOD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amj01002
]
102560576 (YOD1)
Peptidases and inhibitors [BR:
amj01002
]
Cysteine peptidases
Family C88
102560576 (YOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_OTU1_C
OTU
OTU1_UBXL
UBL_USP40
Fn_bind
ubiquitin
zf-C2H2_2
Zf-C2H2_ZNF451_5th
Motif
Other DBs
NCBI-GeneID:
102560576
NCBI-ProteinID:
XP_019332824
UniProt:
A0A151MAP0
LinkDB
All DBs
Position
Un
AA seq
304 aa
AA seq
DB search
MLRLRCKARSGTHPLPGLTAHSRLRDLQAALANLTGVPAAAQRLLLGFPPRGLDLSDAER
RLGELGIHSGDTLIVEEDTTKPTPESPIIAKRSAPNSVRETLPVLARRVVPADNSCLFTS
IYYVVEGGVYDPACAPEMRSLIAQIVASDPESYCEAVLGKTNHEYCEWIKREDTWGGAIE
VSILSKFYQCEICVVDTQTVRIDRFGEDAGYPKRVLLIYDGIHYDPLERKLPNSDVPPLT
IFSTTDDVVLAQALELADEARRKRQFTDVNRFTLRCMVCQKGLTGQAEARDHAKETGHTN
FGEV
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgttgcggctgcgctgcaaggcccggagcggcacccacccgctgcccggtctcacggcg
cactcccgcctgcgggacctgcaggccgcgctcgccaacctcaccggcgtgcccgccgcg
gcgcagcgcctgctgctcggcttccccccgcgcggcctggacctcagcgacgccgagcgg
cggttgggcgagctcggcatccactcgggcgacactctaatagtcgaagaggacaccacg
aaacccacgcccgagtcgcccataattgcgaagaggagcgcgccgaattcggtcagggaa
acgctgcccgtgcttgcgaggagggtcgttccggcagataactcctgtctctttacgagt
atatactatgtggtagaaggaggcgtttatgatccagcttgtgccccggagatgcgcagt
cttatagctcagatagtagcgagcgatccagagtcctattgtgaggcagtcctagggaaa
accaaccacgagtattgcgagtggatcaaaagagaagacacgtggggaggagccattgaa
gtatccattttgtctaagttttatcagtgtgaaatctgcgtagtggacacgcagaccgtc
cgaattgaccgttttggggaagacgcggggtacccgaagcgggtccttctcatttacgac
ggcattcactacgacccgctggagcgcaagttgcccaactcagacgtgcctcccctgacc
attttctcaacaactgatgatgttgttcttgcacaagcgctggagctagcggatgaagcg
aggcgaaagaggcagtttactgatgtgaatcgctttaccctgaggtgcatggtgtgccag
aaggggttaactggacaagcagaagccagagaccacgccaaggagactgggcacaccaat
tttggagaagtgtga
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