Alligator mississippiensis (American alligator): 102560690
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Entry
102560690 CDS
T03087
Symbol
ATG4D
Name
(RefSeq) autophagy related 4D cysteine peptidase
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04136
Autophagy - other
amj04140
Autophagy - animal
amj04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
102560690 (ATG4D)
04140 Autophagy - animal
102560690 (ATG4D)
04136 Autophagy - other
102560690 (ATG4D)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amj01002
]
102560690 (ATG4D)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102560690 (ATG4D)
03029 Mitochondrial biogenesis [BR:
amj03029
]
102560690 (ATG4D)
Peptidases and inhibitors [BR:
amj01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
102560690 (ATG4D)
Membrane trafficking [BR:
amj04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
102560690 (ATG4D)
Mitochondrial biogenesis [BR:
amj03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
102560690 (ATG4D)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
102560690
NCBI-ProteinID:
XP_006265658
LinkDB
All DBs
Position
Un
AA seq
457 aa
AA seq
DB search
MRLPPLPVAPPMHSVSPAAAQYGSPEERGAPRAGGTQGGCAEGGEPDEVDRLKGRLLSAW
NNVKYGWTVKTKTHFSKHSPVYLFGRDYRLDTEEAVERFQTDFASRLWLTYRRDFPPLGS
GLWSTDCGWGCMLRSAQMLLAQGLLLHVLGRDWTWPDAPFSASLAEMEPGKLAASEQGWR
LWPSAAVPSLSPRQQEEEQQHRTLVSWFADHPQAPFGIHRLVELGRGSGKKAGDWYGPSI
AAHILRRAVESSPGTSHLAIYVSQDCTVYKGDVAGLLRGGAAGAVIVLVPMRLGGETLNP
VYVNCVKELLKLKACLGIIGGRPRHSLYFVGFQDDYLLYLDPHYCQPSVDTSQECFPLES
YHCGSPRKMAFAKMDPSCTIGFYTQAGQDLDTLCAQLAQVLKAASTKDKYPMFSVVDGRA
QDYGLEELCSRLAPLPALRPGRRSKGKKPEADDFVFL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgcctcccctccccgtggccccccccatgcattcggtgtcaccagccgcagca
cagtatgggagcccagaggagcgtggtgccccccgggctgggggcacccaggggggctgc
gcggagggtggggagccagacgaggtagaccgcctcaagggccggctgctctctgcttgg
aacaacgtcaagtatggctggacagtgaagaccaagacccacttcagcaagcactcacct
gtgtacctcttcggccgtgactatcgtctggacactgaggaggctgtggagcgcttccag
acagacttcgcctcacgcctgtggctcacctaccgccgtgacttccctcccttgggcagc
gggctgtggagcacagactgtggctggggctgtatgctacgtagtgcccagatgctgctt
gcccaggggctgctgcttcacgtcctcggccgagactggacctggccagatgccccgttc
agtgctagcctggcggagatggagccagggaagcttgcggcatccgagcaaggctggcgc
ctctggccttccgctgctgtgcctagcctcagcccccggcagcaggaggaagaacagcag
caccgcaccctggtctcctggtttgccgaccacccgcaggccccatttggcatccaccgc
ctggtggagctgggtcgcggctctggaaagaaggctggggactggtacggcccctccatc
gctgcccacatcctcaggagagctgtggagagcagccctgggaccagccacttggccatc
tatgtgtctcaagactgcacagtgtacaagggggatgtggctggcctgctgcgtggaggg
gcagctggtgctgtcatcgtgctggtgcccatgcgcctggggggagagaccctgaaccct
gtttatgtaaactgtgtgaaggagctgctgaagctgaaggcctgcctgggcatcattggg
gggcggcccaggcactcactttactttgtcggcttccaagatgactacctgctgtacctg
gacccgcactactgccagccctctgtggacaccagccaggagtgctttccactggagtcc
taccactgcggctccccccggaagatggcattcgccaagatggatcctagttgcaccatc
ggcttctatacccaggccgggcaggatctggatactctctgtgcccagctagcccaggtg
ctaaaagctgcttctaccaaggacaagtaccccatgttctctgtggtggatggccgggcc
caggactatgggctggaggagctgtgctcccgcctggcccctctccctgccctgcgtcct
gggaggcgtagcaagggaaagaagccagaggctgatgactttgtcttcttgtga
DBGET
integrated database retrieval system
