Alligator mississippiensis (American alligator): 102560777
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Entry
102560777 CDS
T03087
Symbol
COPA
Name
(RefSeq) coatomer protein complex subunit alpha
KO
K05236
coatomer subunit alpha
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102560777 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amj04147
]
102560777 (COPA)
Membrane trafficking [BR:
amj04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
102560777 (COPA)
Exosome [BR:
amj04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102560777 (COPA)
Exosomal proteins of bladder cancer cells
102560777 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
102560777
NCBI-ProteinID:
XP_006267538
UniProt:
A0A151M7D0
LinkDB
All DBs
Position
Un
AA seq
1224 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNVLYYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSILIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDRLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVAERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDP
EKETIPDIDPDAQLLQPPAPVMPLDTNWPLLTVSKGFFEGTIASKGKGGAMAADIDIDTV
GTEGWGEDAELQLDEDGFVDAADGFGDEAVGKGQEEGGGWEVEEDLDLPPELDVPVGPAG
GAEDGFFVPPTKGTSPAQVWCNNSQLPVDHVLAGSFETAMRLLHDQVGVTNFGPYKQLFL
QTYARGRTTYQALPCLPSMYGYPHRNWKEATLKNAVPAVGLKLNDLIQRLQLCYQLTTSG
KFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLIAICREYIVGLSMEIERKKLPKETLEQ
QKRICETAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQ
TRKILSACEKNPTDTYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYYPEYQGQI
CRVTTVTEIGKDVIGLRISPLQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccaagttcgagaccaagtcggcccgggtgaaagggctcagctttcacccaaag
aggccctggatcctaacaagtttgcacaatggtgtgatccagttgtgggattaccggatg
tgcaccctcattgacaaatttgatgagcacgatggacctgtccgtggtattgatttccac
aaacagcaacctctctttgtctctggaggtgatgactacaaaatcaaggtctggaattat
aagctacgccgctgccttttcaccctgctgggacacctggattacattcgtaccaccttc
ttccaccatgaatacccctggattctgagtgcgtcggatgatcaaaccatccgggtttgg
aactggcaatccagaacctgcgtatgcgtgctgactggacacaaccactatgtgatgtgc
gcccagttccacccttcggaagacctggtagtgtcagccagcttggatcagactgtgcgc
gtttgggatatttctggcctaaggaagaagaacctgtcccctggagctgtggagtcggat
gtccggggaataactggcgtggatttgtttgggaccacggatgcagttgtgaagcatgtt
cttgagggacatgaccgcggggtgaactgggctgctttccaccccaccatgcctctcatt
gtgtccggggctgacgatcggcaggtgaagatctggaggatgaatgaatcaaaggcctgg
gaggtcgacacttgccggggacattacaacaatgtgtcatgcgcagtctttcacccgcgg
caggaactgatccttagcaattcggaagataagagcattcgtgtctgggatatgtcgaag
cgcactggtgtccagaccttccgccgagatcatgatcgcttctgggttttggctgctcac
cccaacctcaacctctttgctgcaggccatgatggtggcatgattgtgttcaaactggag
cgtgagcggcctgcctatgctgtgcatgggaacgtgctgtattacgtgaaggaccggttc
ctccgtcagctcgacttcaacagctccaaggatgttgctgtcatgcagctgcgaagcggt
tccaagttcccggtgttcaacatgtcatacaacccagcggagaatgctgtcctgctctgc
acgagagccagcaacctggagaacagcacctatgacctctacaccatccccaaggatgca
gactcgcagaaccctgacgcccctgaagggaagcgctcctccgggctgacagctgtgtgg
gtagctcgtaaccgctttgcagtcctggatcgcatgcactcgatcctaatcaagaacctg
aagaacgagatcaccaagaaggtgcaggtgccaaactgcgatgagattttctatgctggc
actgggaacctgctgctaagggatgctgactccatcaccctgttcgacgtgcagcagaag
cgaactttagcctcagtgaagatctccaaggtgaagtatgttatctggtcagctgacatg
tcccacgtggctctgctggctaagcatgccatcatgatctgcaacaggaagctggagtcc
ctgtgtaacattcatgaaaatatccgggtcaagagcggtgcctgggatgagagtggagtc
tttatctataccaccagcaaccacatcaaatacgctgttaccactggggaccatggaatc
atccgcaccttggacctgccgatctacgtcacccgcgtgaagggaaacaacgtgtactgc
ctggacagggagtgtcggcccagggtcctgaccattgaccccactgagttcaagttcaag
ctggccctgatcaacaggaagtatgatgaggtgttgcacatggtgaggaatgccaagcta
gtgggccagtccatcattgcctacctgcagaagaagggctacccagaggtggcgttgcat
tttgtcaaggatgaaaagacccgcttcagcctggccctggagtgcggcaacattgagatt
gccctggaagcagccaaggctctggacgacaagaactgctgggagaagctgggcgaggta
gccttgctgcaggggaaccatcagatcgtggaaatgtgctaccagcgcaccaaaaatttc
gaccggctctccttcctctatctcatcacaggcaacctggagaagctccggaagatgatg
aaaattgctgagatccgtaaggacatgagtggccactaccagaatgccctgtacctcgga
gacgtggcagagagagtgaggatcctgaagaactgtgggcagaagtccctggcctacctc
acagctgccacccatggcttggacgaggaagctgagagcctgaaggagacatttgaccct
gagaaggaaacgatcccagatattgaccccgacgcgcagctgctccagcctcctgctcct
gtcatgcctctagacacaaactggccactgcttactgtctccaaaggattctttgaagga
acaatcgcaagcaaaggcaaaggaggtgcaatggctgctgacatcgacattgacacagtt
ggcactgagggctggggggaggatgccgagctgcagctggatgaagatggctttgtggat
gctgcggatggctttggagatgaagccgtcgggaaagggcaggaggaaggaggtggatgg
gaagtcgaagaggatttggaccttccccccgaattggacgtcccggttgggccagcagga
ggagcagaggacgggttcttcgtgccacccaccaaaggcaccagtccggcccaggtctgg
tgcaacaactcacagctgcctgttgatcatgtcctggctggctcgttcgagacggccatg
aggctccttcacgaccaggtgggagtgactaatttcggcccctacaagcagctgttcctg
cagacttatgcccggggccgcaccacctaccaagccctgccttgcctcccctccatgtat
ggatacccgcatcgcaactggaaggaagctaccctgaagaacgcagtcccggcagttggc
ctgaagctgaatgacctgatccagcgcctgcagctctgctaccagctcaccacctccggc
aaattcgaggaggcagtggagaagttccggtccatcctgctgagcgtgccgctgctcgtg
gtggacaacaagcaagagattgccgaggcccagcagctgattgccatctgccgggagtac
atcgtggggctctccatggagattgagaggaagaagctccccaaggagaccttggagcag
cagaagcgcatctgcgagacggccgcctacttcacccactccaacctgcagcctgtgcac
atgatcctggtgctccgcactgccctcaacctcttcttcaagctcaagaacttcaagaca
gctgccacctttgctcgccgcctcctggagctgggacccaagcccgaggtggcccagcag
actcgcaagatcctgtctgcctgtgagaagaaccccaccgacacctaccagctcaactat
gacatgcacaaccccttcgacatctgcgctgcctcctaccggcccatctaccgcggcaag
cccgtggagaagtgcccgctcagcggggcctgctactaccctgagtaccagggccagatc
tgccgtgtcaccacggtcacagagatcggcaaagatgtcatcgggctgcgcatcagtccc
ctgcagttccgctga
DBGET
integrated database retrieval system
