Alligator mississippiensis (American alligator): 102560783
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Entry
102560783 CDS
T03087
Symbol
RNF180
Name
(RefSeq) ring finger protein 180
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amj04121
]
102560783 (RNF180)
Enzymes [BR:
amj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102560783 (RNF180)
Ubiquitin system [BR:
amj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102560783 (RNF180)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF180_C
zf-C3HC4_3
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_5
RING_XB3-XBAT31
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
102560783
NCBI-ProteinID:
XP_014449559
LinkDB
All DBs
Position
Un
AA seq
569 aa
AA seq
DB search
MNSQEADMLRCWKCRKYVANSDCLIKCHGKQQCEFSTAAQNTCNVWHMNLEDLPDWVKCA
IEKAQWTIGKLNCPFCGTRLGGFNFVRNTKCSCGQFANIHFCKSRTDFQPACSVKLPRSS
LKHLSLCKAQSGFNKKIQHKVTGGTLEIRNPGISYMTKNYNGSGRLTEALCLEVRATNFD
INSRKPHFKVFNQKKSISASWPVNDIHLIKAFHRKSHSLDLNIREKLILLPNLCGTSGNG
PIYHRQNDTQPIYPNSNLQLESSRENSFQGLYSFDADELSKRFSVTSCNALTQRGTECEC
GFQASEQCSGSATADQLPSVMDLFPSASSAEDDDTGQENITPVDQEPASISLVTVHQKKL
SKRERNKLKSLRRKQRRRERWLQKQISNDNVNTDDEHEHRGDKESFLCAVCLDVYFNPYM
CYPCRHIFCEPCLRMLAKDNPTSTPCPLCRTIIARVFFQSELNNSTKSFFPSEYLKLKEN
FQKSSSAKWPLPSCRKAFRVFEAGFQRHADPVARRHFPHAAHRMDYMDFEDDSRGWRFDM
DMVIIYIYSVNWVIGFIIFCFLCYFFFPF
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaatagccaagaggctgatatgcttcggtgttggaagtgtagaaaatatgtagcaaat
tctgattgcctcattaaatgtcatgggaaacaacagtgtgaattttcaactgctgctcag
aatacttgtaatgtctggcacatgaacttagaagaccttcctgactgggtaaaatgtgct
attgaaaaggcacagtggacgattggaaaactgaactgcccattctgtgggacccgtctg
gggggctttaactttgttcgcaacacaaaatgttcctgtggtcaatttgcaaatatacat
ttctgcaagagtcggactgattttcagccagcttgttcagttaaactcccaagatcatca
ttaaaacacttgtcactttgtaaagctcagtctggttttaacaagaaaatccaacacaaa
gtgacaggtggaactttggaaatcagaaatccagggatttcatacatgaccaaaaattat
aatggaagtggaagattaacagaagcactttgcctagaggtgcgagcaaccaactttgat
ataaatagtagaaaaccacactttaaggtgttcaatcaaaaaaagagtatttcagcttcc
tggcctgtgaatgatatacatttgataaaagcttttcatagaaaatcacatagtttggat
ttgaacatcagagagaaactcattttgttgcctaatttatgtggaacttcaggtaatgga
cctatttatcacaggcaaaatgatacacagcccatttacccaaacagtaatttgcaatta
gagtccagtagagagaattcctttcagggcctatatagttttgatgctgatgaactgtca
aaaaggttttcagttacttcctgtaatgcattaacacaaagggggacagaatgtgaatgt
ggtttccaagcatctgaacaatgttctgggagtgccactgctgaccagctaccttctgtg
atggatctgtttccatctgcaagttctgcagaagatgatgacactggacaggagaatatc
acaccagttgatcaggaacctgccagtatctccttagttactgtccaccaaaaaaagcta
agcaaaagagagagaaacaaattgaagagtttgaggagaaaacaaaggaggcgtgagagg
tggctacagaagcagatttcaaatgataatgtcaacacagatgatgagcatgaacacaga
ggagataaagaaagtttcctttgtgcagtgtgcctggatgtctatttcaatccatacatg
tgctatccatgtcgccacatcttttgtgagccttgcttaaggatgcttgccaaagacaac
ccaaccagtactccatgtccactgtgtcgcacaataattgcaagagtctttttccaatca
gaactgaacaactctacaaaatctttcttcccttcagaatatttgaaattaaaagaaaat
tttcaaaaatcaagttctgcaaaatggcctctgcccagctgcagaaaagcattcagagtt
tttgaagcaggttttcaaaggcacgcagatcctgtagcaagaagacatttcccacatgct
gctcaccggatggactatatggattttgaggatgatagccgtggatggcgctttgacatg
gacatggtgataatttacatttattctgtcaactgggtaataggattcattattttctgt
tttctatgctactttttctttcctttttag
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integrated database retrieval system
