Alligator mississippiensis (American alligator): 102560909
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Entry
102560909 CDS
T03087
Symbol
CDKAL1
Name
(RefSeq) CDK5 regulatory subunit associated protein 1 like 1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amj03016
]
102560909 (CDKAL1)
Enzymes [BR:
amj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
102560909 (CDKAL1)
Transfer RNA biogenesis [BR:
amj03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
102560909 (CDKAL1)
Prokaryotic type
Methylthiotransferases
102560909 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
102560909
NCBI-ProteinID:
XP_019345948
LinkDB
All DBs
Position
Un
AA seq
578 aa
AA seq
DB search
MPAACDSVLEDIEDIVSAEDLKPHDRQFVRKSIVPKVRKRNSQKNVQADDDPPSDSIIPG
IQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENSTEADLWLLNSCTVKSPAEDHFRNS
IKKAQEENKKVVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQK
KDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNSCTYCKTKHARGDLASYPVEELVGRA
KQSFQEGVCEIWLTSEDTGAYGRDIGTELPTLLWKLVEVIPEGAMLRLGMTNPPYILEHL
EEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKRVVDFLKEKVPGITIATDI
ICGFPGETDEDFQETMKLVEEYRFPSLFINQFYPRPGTPAAKVHQVPALVKKQRTKDLSQ
LFHSYSPYDHKVGERQRVLVTEESFDSKFYVAHNRFYEQVLVPKDPGFIGKMVEVDIYEA
GKHFMKGQPVSDAKVYTPSLTKPFAKGEVSGVTEELRHALKNGTNLKTCPSVGIQEKTSL
CCRMVMQIPWQQRGRGLKILSVSLALLAVLVTFYYGGV
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgcctgtgattcagtgcttgaagacattgaagatattgtgtcagcagaagat
ctgaaaccacatgaccgacagtttgtaagaaaaagtattgttcctaaagtgagaaaacgc
aactcgcaaaagaatgttcaggcagatgatgatcccccaagcgacagcattattcctggt
atacagaaaatctggatacgtacgtggggttgctctcataacaattcagatggagaatat
atggctggacagttggcagcttatggatacaaaattacagagaactccacagaagcagac
ttatggctgctaaacagttgcacggtaaaaagcccagctgaagaccacttcagaaactca
attaagaaagcccaagaagaaaacaagaaagtggttttagctggatgtgtcccacaagcc
caacctcgtcaggactacctaaaaggcctaagcatcataggggttcaacaaatagatcgt
gtagtagaagttgtggaggaaactattaaaggtcattctgtgagactcttgggtcagaaa
aaggataatggaaaacggttggggggagcgcgattggatttgccaaagattaggaagaac
ccgctgatagaaattatttccatcaatacaggatgtctaaattcatgtacatattgtaaa
acgaagcatgcccgaggagacctagcaagttatccagttgaagagctagtgggcagagcc
aaacagtcttttcaagagggtgtttgtgagatatggctgaccagtgaagacacaggggct
tatggcagagacattggcacagagctccctacacttctgtggaagctggttgaggttatt
cctgagggagctatgttgagacttggcatgacaaaccccccttatattttggagcatctg
gaggaaatggcaaagattcttaatcatccaagagtatatgctttcctccacataccagtt
cagtctgcttctgacagcgtgctcatggacatgaaaagagaatactgtgtggcagacttc
aaacgggtagtggatttccttaaagaaaaagtgcctggaataacaattgctacagacatc
atctgtggtttccctggggagactgatgaagattttcaagaaacaatgaaacttgtagaa
gagtacaggtttccaagcctctttattaatcagttttacccacgaccaggaacccctgct
gcaaaagtgcatcaagttccagccttagtgaaaaagcaaagaacaaaggatctatcccag
ctgtttcattcatacagtccttatgatcacaaggttggcgagaggcagagagttctggtg
acagaagaatcttttgattccaagttttatgttgctcacaatcgattctatgagcaggtt
cttgtgccaaaggatcctggatttataggtaaaatggtagaagtggacatttatgaagca
ggaaaacattttatgaaagggcagccagtgtcagatgccaaagtgtataccccatccctc
accaaaccgttcgcgaaaggagaggtttctggtgtaacagaggagcttagacatgcactg
aagaatggcacaaatttgaaaacatgcccttctgttgggattcaagaaaaaacatcattg
tgctgcaggatggtgatgcaaattccatggcaacaaagaggacgtggactaaagatactg
tctgtgagcctggctttactggcagtccttgttaccttttactatggaggtgtataa
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