Alligator mississippiensis (American alligator): 102561015
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Entry
102561015 CDS
T03087
Symbol
PTCHD1
Name
(RefSeq) patched domain containing 1
KO
K24682
patched domain-containing protein
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
amj04990
]
102561015 (PTCHD1)
Domain-containing proteins not elsewhere classified [BR:
amj04990
]
Other domain-containing proteins
Patched domain-containing proteins
102561015 (PTCHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
102561015
NCBI-ProteinID:
XP_006266959
UniProt:
A0A151N0B7
LinkDB
All DBs
Position
Un
AA seq
888 aa
AA seq
DB search
MLRQVLHRGLRTSFSRLGHFVASHPVFFASAPVLISILLGASFSRYHIEESVESLLAPKH
SLAKIERNLVNSLFPVNRSKHRLYSDLQTPGRYGRVIITSFRKANMLDQHHTELILKLHS
AVTRIQVQRPGFNYTFAHICILNNDKTCIVDDIVHVLEELKTARSSNRTNFAITYPITHL
KDGREVYNGHQLGGVTVHSKDRVKSAEAIQLTYYLQAINSLNDMVAEKWESIFCNTVELF
QKSNRKVKMYPFTSSSLKEDFQKTSRVSERYLITSLVLVVSLAILCCSMQDCVRSKPWLG
LLGLLTISLATLTAAGIINLTGGKYNSTFLGIPFIMLGHGLYGTFEMLSSWRKTREDQHV
KERTAAVFADSMLSFSLTTAMYLVTFGIGASPFTNIEAARIFCCNSCIAIFFNYLYVLSF
YGSSLVFTGYIENNYQHSIFCRKVPKPEVLQEKPAWYRFLLTAKFSEDTTDSEETNTYES
HLLVCFLKRYYCDWITNTYVKPFVVLFYLVYISFALMGYLQVNEGSDLSNIVATATRTIE
YTTAQQKYFSNYSPVIGFYIYESIEYWNTSVQEDVLEYTKGFVRISWFESYLNYLRKLNI
STGLPKKNFTDMLRNSFLKAPQFAHFSEDIIFSKKYNNEVDVVASRMFLVAKTMETKREE
LYDLLETLRKLSLTSKVKFIVFNPSFVYMDRYASSVGAPLQNSCISALFLLFFSAFLVAD
SLINVWLTLTVASVEFGVIGFMTLWKVELDCISVLCLIYGINYTIDNCAPLLSTFVLGKD
FTRTKWVKNALEIHGVAILQSYLCYIVGLIPLAAVPSNLTRTLFRCLFLIALVTFFHCFA
ILPVILTFVPPSKKKRKEKKNPENREEIECVEMVDMDSTRVVDQITTV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggcaggttttgcacagggggctgaggacgtctttttcccggctcggccacttc
gtcgccagtcacccggtgttcttcgcctccgcccccgtgctcatctccatcctgctgggc
gccagcttcagccgctaccacatcgaggagagcgtggagtcgctcctggcccccaagcac
agcctggccaagatcgagaggaacctggtgaacagcctcttccccgtgaaccgctccaag
caccggctctactccgacctgcagacccctggccggtacggcagggtcatcatcacctcc
ttccgcaaggccaacatgctggaccagcatcacaccgagctcatcttgaagttgcactct
gctgtgaccaggatccaagtacaaagacctggtttcaattacacatttgcccatatatgt
atcctgaataacgacaagacttgcatagtggatgacatagtgcacgtattggaggaactg
aagaccgctcgttcttctaatcgaacaaattttgctatcacgtatccaatcactcactta
aaggatggcagggaagtgtataatgggcaccagcttggtggagttactgtgcacagcaaa
gatcgggtgaagtctgcagaagccattcagctcacctactacttgcaggcaatcaactcc
ctgaatgacatggtagcagaaaagtgggaatccattttttgcaacactgttgaacttttc
cagaagtctaacaggaaagtcaaaatgtatcccttcacttcttcttcactgaaagaggat
ttccagaagactagcagggtgtcagaacgttacctgatcacaagtctagtacttgtggtc
agcttggctatactctgctgctccatgcaggattgtgtccgtagcaaaccttggcttggt
ctcctaggcttgttaacaataagcctagccactctgactgcagctggaatcattaatcta
actggtgggaaatacaattccacgttcctgggaattcccttcatcatgttaggtcatggg
ttatatgggacttttgaaatgttatcctcctggaggaaaaccagagaagaccaacatgtt
aaagagagaactgcagctgtgtttgcagactccatgctctccttttctctcaccactgcc
atgtacctggtcacttttggaataggtgccagtcccttcactaacattgaagcagccagg
attttctgctgcaattcctgtattgcaattttcttcaactacctctatgtactctccttt
tatggttccagcctggtgtttactggctacatagaaaacaactaccagcatagtatcttc
tgcagaaaggtaccaaagccagaggtattgcaagagaagcctgcgtggtataggtttctt
ctgacagccaaattcagtgaggacacaacagattcagaggaaacaaacacttacgaaagt
catctattggtatgtttcctaaaacgctattactgtgactggataacaaacacttatgtc
aagccttttgtagttctcttttaccttgtttatatttcctttgccttaatgggctacctg
caggtcaatgaagggtcagaccttagtaacattgtagcaactgcaactcgaaccattgag
tatactactgcccagcaaaagtatttcagtaactacagcccagtcattgggttttatatc
tatgagtcaatagaatactggaacacaagtgttcaagaagacgtgctagagtataccaag
gggtttgtgagaatatcctggtttgagagctacttaaattatcttaggaaactcaacata
tctactggattgcccaaaaagaattttactgatatgttgaggaactctttcctgaaagcc
ccccagtttgcccatttttcagaggatatcatcttttccaagaaatataataatgaagtc
gatgtagtggcttccaggatgttcttggtggccaagacgatggaaaccaagagagaagaa
ctttatgatctcctggaaaccttgaggaagctctctctcacctccaaggtgaaattcatc
gttttcaatccatcatttgtgtacatggatcgttatgcctcctcagtgggagccccctta
caaaactcctgcatcagtgctttatttctgctcttcttctctgcattcctggtggcagac
tctctgatcaatgtctggctcactctaactgttgcctcagtcgaatttggagttataggt
tttatgaccttgtggaaagtggaactggattgtatttctgtgttgtgcttaatttatgga
attaattatacaattgacaactgtgctccactgttatcaacttttgtcctgggcaaagat
ttcacaagaactaaatgggtaaaaaatgcccttgaaattcacggggtagctattttacag
agctacctctgttatattgttggtctgattcctcttgcagctgtgccttcaaatctgacc
cgtacactgttcaggtgcttgtttttaatagcattagtcaccttctttcactgctttgcc
attttacctgtgatactgacttttgtgccaccatccaagaaaaaaaggaaagagaagaag
aatcctgaaaatcgtgaggaaatagagtgtgttgaaatggtggatatggatagtacccga
gtggttgaccaaattacaacagtctga
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