Alligator mississippiensis (American alligator): 102561044
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Entry
102561044 CDS
T03087
Symbol
ATG2B
Name
(RefSeq) autophagy related 2B
KO
K17906
autophagy-related protein 2
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04136
Autophagy - other
amj04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102561044 (ATG2B)
04136 Autophagy - other
102561044 (ATG2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102561044 (ATG2B)
03029 Mitochondrial biogenesis [BR:
amj03029
]
102561044 (ATG2B)
Membrane trafficking [BR:
amj04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
102561044 (ATG2B)
Mitochondrial biogenesis [BR:
amj03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
102561044 (ATG2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
102561044
NCBI-ProteinID:
XP_014451946
LinkDB
All DBs
Position
Un
AA seq
2078 aa
AA seq
DB search
MPWPFSESIKKRACRYLLQRYLGHFLQEKLSLEQLSLDLYQGTGSLAQVPLDKWCLNEIL
ESADAPLEVTEGFIQTISLSVPWGSLLQDNCALEVKGLEMVFRPRPRLASGSEPMYWSSF
MTSSMQLAKECLSQKLTDEQGEGSQPFEGLEKFAETIETVLRRVKVTFLDTVLRIEHVPE
NSKSGSALEIRIERTMYCDETADECSGINVHQPTAFAHKLLQLSGVSFFWDEFPASAKSS
PVCSATQLATEPKLSPSWNPKIVYEPHPQLTRNLPEVPPSDPVQISRLIGRMELSLTLKQ
NEVLPGAKLDVDGQIDSIHLFLSPRQVHLLLDILAAIAGPESPSRIELSNKDRKNRPMQQ
EDEYRIQMELKRYLRKDSLSAGASSEQSFYETETARTPSSREEEVFFSMADMDMSHSLSS
LPPLGDPPTMDLDLSLTSTYTTTPAGSPLSATVLQPTWGDFLDQNKHEPPPPRGSSLTPS
IVHQPPLRRTSIPSRSVSVDESRPELLFRLAVGTFSVSVLHIDPLPPPETSLNINPLTPM
ASDFFTRIEKIDPVKFSAEDFMSFREVFAEACSHDHLRFIGSGIKVSYEQRQRSASRCFS
TDLSIGQMELLECLFSTDSHSVQPHYTELLTFHSERENDSHPTSCLQLHYKHSDNRGPQG
SQGRLSSVPQKAELQVKLNPVFCELDISIVDRLNSLLQPQKLTTVEMMASHMYASYNKHI
SLHKAFTEVFLDDSRTPANYRISVQVTAPALDLSVRFPIPDLRSDQERGPWFRKSLQKEI
LHLEFTDMEFKTELIGGSTPEQIKLELTFKELTGLFEEDKAESSVKFFQVCSGIDGDLTT
SDNFDWPRIVLKINPLAVHSILERIAPEEEEEGDGNFQEEEEGGSHSLKDVCDFRRPEPS
PFSSRRVMFENEEMVMPGDAAEMTEFQEKAISNSHYVLELTLPNVHLTLPNKSFYEKLYN
RISNDLLLWEPTAPSPVETFENISYGVGLSVASQLINTFNKDGFSPFKSAIHYVDDESGS
EEETLQYYSTVDPNYRSRRKKKLESQNKNTQSFLSVLLNVNHGLVSIFTDVKEDDGNILE
GRHGEFWFEFKSGSLFCVTKYEGFEDKHYICLHSSSLSLYHQGMVDGTVPSSEMRLPSMI
HPHWLEPTIYFSEEDGLCRTSSDGVGVDCLSMLSVAVKIQSDKLESNTKEFLVAVGLRGA
TLQHRVLPSGLSWHEQILCFLNISDEPVLGYNPPASVTTFHIHLWSCALDYRPIFLPIRS
LLTVETFSISSSVALDKSSSTLRIILDEAALHLSDKCNTVAVNMHRDYVRVMDMGLLELT
ITAIKPGSDQERTKPRFELHCSSDIIHIRTCSDSCAALMNLIQYIACYGDLHPPSKTEVK
TGAVKQKTKADVSSRPSSEGPVLAEAEQQILRDLMSDAMEEIEIHQAASPIKPQSNGILN
EKSQTREPSCSDLFLFPDESGNISQEPSPTYSFTHHLINEAMGDVPTENDDFCILFAPKA
AVSEKEEEPVVKVMVDDPIVVKENHFSQPLKKTDTSKAPLHFPIPLVRYVVKEISLIWHL
YGGKDLGPAPPTSPAKSFISPHSSPSHTPTKHGRSTVCGGRRRNPDFLMEIQLSKVKFQH
EVYPPVGPECESNLLEQPVSRQVFIVQDLEIRDRLATSQMNKFLYLYCSKEMPRKAHSNM
LTVKALHVRPESGRSPQECCLRVSLMPLRLNIDQDALFFLKDFLTSLSSEVELLMTPDPE
VKKSPGADVTCTLPRHFSNFKDPSPVISFTVHKQSSQNGSADSVDVVNGDDHNFSHEMAS
YRDQPIFFREFRFASEVPIRLDYHGKHVSMDQGTLAGILIGLAQLNCSELKLKRLCYRHG
LLGVDKLFSYAITEWLNDIKKNQLPGILGGVGPMHSLVQLVQGLKDLVWLPIEQYRKDGR
IVRGFQRGAASFGTSTAMAALELTNRMVQTIQAAAETAYDMVSPGPSCIETKKMKRLSRY
RLAHQPVDLREGVAKAYSVVKEGITDTAQTIYETAAREHENRGVTGAVGGVLRQIPPAVV
KPLIVATEATSNVLGGMRNQIRPDVRQEESQKWRLGED
NT seq
6237 nt
NT seq
+upstream
nt +downstream
nt
atgccgtggcccttctccgagtccatcaagaaacgggcctgccgctacctgctgcagcgc
tacctcggccacttcctgcaggagaagctcagcctggagcagctcagcctggacctctac
cagggcaccggctccctggcgcaggtcccgctcgacaagtggtgtctaaatgagatcctg
gagtcagcagatgcacctctggaagtcacggagggatttatccagacaatttctttgtcc
gttccctgggggtcattgctacaggataactgtgcactagaagtgaaaggattagagatg
gtcttcaggccaaggcctcgtctagcatctgggtctgagcctatgtattggtcaagcttt
atgaccagcagcatgcaacttgcaaaagagtgtctgagtcaaaaattgacagatgaacaa
ggagaaggatctcagcctttcgaagggcttgagaagtttgcagaaactattgaaacagtt
ctaagaagagtaaaagttacctttttggatactgttttgcgaattgaacatgtgccagaa
aattctaaaagtggatctgcacttgaaatccgaatagaaagaactatgtactgtgatgaa
actgctgatgaatgctctggaattaatgtacatcagcccacagcatttgctcacaagtta
cttcagctctcaggcgtctctttcttctgggatgagtttcctgcatcagcaaagtcctca
ccagtgtgttcagctacgcagttggcaactgaaccaaagctttcacctagctggaaccca
aaaattgtatatgagccacatccacaattaacaagaaacttgccagaagttcctccctct
gaccctgtacagattagtaggctgattgggagaatggagctgagtcttaccttaaagcaa
aatgaagtacttcctggagctaagttggatgtagatggacagatagattctatacacctg
ttcctgtcaccaaggcaggtacatcttctactggacattttagcagccattgctggacca
gagagccccagtaggatagaattgtcaaataaagataggaagaacagaccaatgcaacag
gaagacgagtatcggattcagatggagttgaagcgttacttgcgaaaagactctttatca
gcaggagcatcatctgagcagagcttttatgagacagagacagccagaacgccttctagc
cgtgaagaagaagttttcttctcaatggctgatatggacatgtctcatagcctttcctct
cttccacctctcggagacccaccaactatggatctagacctgtctttaactagtacctac
actactaccccagcaggatctcctctgagtgctacagtgcttcagccaacttggggtgat
tttcttgatcagaataaacatgagccaccaccaccaagaggttcatcacttacacccagt
atagttcaccaaccacccttaagaaggacttccattccatcccgatctgtttcagtggat
gaatccagacctgagctgctttttagactggctgtggggactttctcagtatctgtacta
catattgaccctctaccaccacctgaaacttcactgaacattaaccccttgacaccaatg
gcatcggatttctttacccgaatagaaaagattgatccagttaagttttcagcagaagat
tttatgtccttccgggaagtgtttgcagaggcttgttctcatgaccaccttagatttata
ggtagtggcatcaaagtgtcttatgaacaaagacagaggtctgcatctcgatgtttcagt
acagatttatccattgggcaaatggaacttttggaatgccttttctctactgattcccat
tccgttcaacctcattatacagagctgctaacatttcattctgagagagaaaatgattca
catcctacttcatgccttcagctccattataaacactcagataatagagggcctcagggt
agtcaaggaagactgagctctgttccacagaaagcagaattacaagtcaaactgaatcca
gtgttctgtgaactggacatcagtattgtggacagactaaattctttgcttcagccacag
aaactaaccacggtggagatgatggcatctcacatgtatgcttcttacaacaaacacatt
agtctgcataaagcctttactgaggtttttctggatgattcacgtacacctgcaaactat
agaatttcagtccaagtcacagcaccagcattagatctttctgttcgcttcccaatacct
gatctacggtcagatcaggaaagaggaccatggtttagaaaatcgcttcaaaaggagatc
cttcatcttgagtttacagatatggaatttaagactgagcttataggaggttcaacccca
gaacaaattaaattggagcttacctttaaggagctaactggcttgtttgaagaagacaaa
gcagaatcttcggtaaaattttttcaagtatgcagtggcatagatggagatctgacaacc
tctgacaactttgactggcctcggattgtgcttaaaataaacccactagctgtacactcc
attctggaaaggatagcaccagaagaagaagaagagggagatggtaactttcaagaggaa
gaggaaggaggatctcattctctcaaggatgtctgtgattttagaagaccagagccttcc
cctttttcttctcgtagggtcatgtttgaaaatgaagagatggtcatgccaggagatgca
gctgagatgacagaatttcaggaaaaagcaatcagcaattctcattatgtactggaactt
acattaccaaacgttcacttaacactgccaaacaagagcttttatgagaaactttacaat
aggatcagcaatgatttattattgtgggaacctacagccccgtctcctgtagaaacattt
gaaaatatttcatacggtgttggactctcagtggccagccagttgatcaatacttttaat
aaagatggctttagtccatttaaatctgcaatacattatgtagatgatgagagtggatct
gaggaggaaactctgcaatattattctacggttgatccaaactatcgttcacgcaggaag
aagaagcttgaatcacagaacaagaacacacagagctttctttctgttctgttaaatgtt
aaccatggattagtgtcaatattcacagatgtaaaggaagatgatggaaatatactggaa
ggaaggcatggtgaattctggtttgaatttaagagtggctcattgttctgtgtgactaaa
tatgaaggttttgaagacaaacattacatctgtcttcattctagcagcctcagtttatat
catcaaggtatggtcgatggaactgttccttcatctgagatgcgcctgcctagtatgata
catccccattggttagaacctaccatttatttttctgaagaagatggtctctgcaggacg
tcttcagatggtgtgggagtggactgtttaagtatgctctctgttgcagtgaaaatccag
tctgataaactggaaagcaatacaaaggaatttctagttgctgtaggactaagaggagcc
actctgcagcacagggtattgccttcaggcctaagctggcatgaacagattttatgtttt
ttgaacatttctgatgagcctgttttgggatataatcctccagcttctgttacaactttt
catattcacctgtggagttgcgctcttgattacagacctatctttctgccaatcagatct
ctgcttactgttgaaactttcagcatttccagcagcgttgcattagataagtcctcttct
actctcagaataatcctagatgaggctgctttacatttgtcagacaagtgtaacacagtt
gcagtgaatatgcatagagattatgttcgtgttatggatatgggactactggaattgacc
ataacagcaataaaacctggttctgatcaggagagaacaaaaccacgctttgagctacat
tgttccagtgatataatccatatccgaacatgctcagactcttgtgctgcactaatgaat
cttatacaatatattgcatgttatggggatttgcatccacctagtaagacggaagttaaa
actggagctgtcaagcagaaaactaaggcagatgtctctagccgaccatcttctgaagga
ccagtccttgcggaagcagaacaacagattttacgcgatttaatgagtgatgctatggaa
gaaattgagatccatcaagctgcttcccccattaaaccacaatctaatggaattttgaat
gagaaatctcaaactcgagagccgtcttgctcagatctctttctgtttcctgatgaaagt
gggaacatctcacaagaaccaagtcccacttattcttttactcaccacttgataaatgag
gcaatgggagatgtacctactgaaaatgatgacttctgcattctctttgcacccaaggct
gctgtgtctgaaaaggaggaggagcctgtagtgaaagtaatggttgatgatcccattgtg
gtaaaagaaaaccatttcagccagcctctaaaaaaaacagataccagcaaagcccctctt
cattttcctatccctttggtacgctatgttgtgaaggaaatctctcttatttggcatctc
tatggaggaaaggatttggggcctgcacctcctacttctccagctaagagttttattagt
cctcatagttctccttctcacacaccaacaaaacacggacgtagcactgtatgtggggga
agaagaagaaacccagatttcttgatggaaatacagttaagtaaggtgaaattccaacac
gaggtgtaccctccagttgggccagaatgtgaatccaatctactggagcagccggtgtcc
aggcaggtttttattgttcaggacctggagatcagagatcgcttggcaacatcacaaatg
aataaatttctctatctctactgcagtaaggaaatgcccagaaaagcacattccaatatg
ttaacagttaaagcattacacgtccgtccagagtctggcagatcaccgcaggaatgttgt
ttacgagtgtcattaatgccacttcgcctcaatattgaccaggatgccttgttttttctg
aaggattttttgactagcctttcttcagaagtggaactattaatgacgccagatccagaa
gtgaaaaagtctcctggtgctgatgtaacctgtaccttacccaggcatttcagcaacttc
aaggacccaagtccagtcatttctttcacagtacacaaacaatcaagccaaaatggtagt
gctgactctgtggatgtggttaatggagatgaccataatttctctcatgaaatggcatca
tatagggatcaaccaattttttttagagaatttcgatttgcatcagaagttccaatacga
cttgattaccacggcaaacacgtatcgatggatcagggtactttagctgggattctgatc
ggtcttgctcagttaaattgctcagagttaaagctgaagagactctgctatcgacatggt
ttgttgggtgtggataaattattctcttatgctattactgagtggcttaatgatataaag
aaaaaccagctgccgggaattctgggaggagtagggcccatgcattctttagtacaatta
gttcaaggtctgaaggatttggtgtggctaccaatagagcagtaccgaaaggatggtcgt
attgtaagaggctttcaaagaggagcagcttccttcggtacttccactgcaatggcagct
ttagagctaacaaacaggatggttcaaactatacaggcagctgcagaaactgcttatgac
atggtttccccaggccctagttgtattgagacaaaaaagatgaagcgattatctcgctat
cgcttggctcatcagccagtagatctacgggaaggtgtggctaaagcctatagtgtggta
aaagaggggattacagacactgcccagacaatctacgaaactgctgctcgtgaacatgaa
aacagaggggtaactggagcagtgggaggagtcctccgccaaattccaccagctgtcgtg
aagcctctcattgttgcaacagaggcaacatcaaatgtgttaggtggaatgcgaaaccaa
atcaggccagatgtacgtcaagaagagtctcaaaaatggcgtcttggtgaggattga
DBGET
integrated database retrieval system
