Alligator mississippiensis (American alligator): 102561090
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Entry
102561090 CDS
T03087
Symbol
DEPDC5
Name
(RefSeq) DEP domain containing 5
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
102561090 (DEPDC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102561090 (DEPDC5)
Membrane trafficking [BR:
amj04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
102561090 (DEPDC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Las1
Motif
Other DBs
NCBI-GeneID:
102561090
NCBI-ProteinID:
XP_006267036
LinkDB
All DBs
Position
Un
AA seq
1603 aa
AA seq
DB search
MFRMRTNKVYKLVIHKKGFGGSDDELVVNPKVFLQIKLGDVVEIAHPNDEYSPLLLQVKS
LKEDLQKETISVDQTVAQVFRLRPYQDVHVNVVDPKDVTLDLVELTFKDQYIGRGDMWRL
KKSLVSTCAYITQKVEFAGIRAQAGELWVKSEKVTCGYISEDTRVVFRSTSAMVYIFIQM
SCEMWDFDIYGDLYFEKAVNGFLSDLFTKWKEKNCSHEVTVVLFSRTFYDAKSIDEFPEI
HRASIRQDHEGRFYEDFYKVVVQNERREEWTSLLVTIKKLFIQYPVLVRLEQAEGFPPGY
NSTSAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRM
IDNGIGVDLVCMGEQPLHAVPLFKLHNRSCPGDSRLGDDYNIPHWINHSFYTSKSQLLCN
SFTPRIKLAGKKSLIERAKNSRDSSLGAPKDAENALPIQVDYDGYDAQVFRLPGPSRAQR
CTTFRSVRERESRTRKSSSSYDVSSSPSLQSRTLPPEEVRSQASDDSSLGKISNILMIPR
LHLHQYEVSSSLGYTSTRDVLENMLESQQRDSSAPGRFHVGSAESMLHIRPGGYTPQRAL
INPFAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAEMQGNGQRDLTHSSAE
LLELAYHEATGRHIASRHPGDSISCLTFGGAEEFSNSLVNSNNAGINIRTQNKDTVEDAV
STSPDPILTLSAPPVVPGFCCTVGVDWKSLTTPACLPLTTDYFPDRQSLQNDYTEGCYDL
LPEADIDRRDEEGVQMTAQQVFEEFICQRLMQGYQIIVQPKPQKPATTVPPPLSSSPLYS
RGLVSRNRPEEEDQYWLSMGRTFHKVTLKDKIITVTRYLPKYPYESAQINYTYSLCPSHS
DSEFVFCWVEFSHERLEEYKWNYLDQYICSAGSEDFSLIESLKFWRTRFLLLPACITATK
RIMEGEVHCDVYGDKPRSDEEEWQLLDGFIRFVEGLNRIRRRHRSDRMIRKGAAMKGLQM
AGPISTHSLEQPGPPIGKKGTSALSALLEMEASQKTLGEQQAAMLAGKSSAQPTESGSIA
ITPTYMDSPRKDGAFFMEFVRSPRTASTFYPQVSVDQTAPATLDGSTLISTGQSAERCSA
QALGSSQNIGDQGYATTGSAENSSQQCSVNSLTSSSTLIEILEAMKHPTTGIQLLSEQKG
LSPYSFISAEVVHWLVNNVEGAQTQAMAIDIMQKMLDEQLIVHASGEALRTFIYGFYFYK
IVVDKEPDRVGMQQPPMWHTAAMDDFSAFQRKWFEVAFVAEELLHSEIPAFLLPWLPSRP
ASYASRHSSFSRSFGGRSQAAALLAATVPEQRTVTLDVDVNNRTDRLEWCSCYYHGNFSL
NAAFEIKLHWMAVTAAVLFEMVQGWHRKATSCGFLLVPVLEGPFALPSYLYGDPLRAQLF
IPLNVSCLLKEGSEHLFDGFEPETYWDRMHLLQEAIAYRFGFVQDKYSASAFNFPAENKP
QYIHVTGTVFLQLPYSKRKFSGQQRRRRNSTSSANQNMFCEERVGYNWAYNTMLTKTWRS
SATGDEKFADRLLKDFTDFCWNKDNRLVQFWTDCLDKMHASAP
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atgttcaggatgagaaccaacaaggtctacaagcttgtcatacacaagaagggcttcggg
ggcagtgatgatgaactggtggtgaaccccaaagtgtttcttcagatcaaactgggagat
gtggtggagattgcacaccccaatgatgagtacagccccctgctgctgcaagtgaagtct
ttaaaggaagatttgcagaaagaaactataagtgtggatcagactgttgctcaggtattc
cgactgagaccataccaggatgtccatgtgaatgttgttgacccgaaggatgtgaccctt
gacctggtggagcttacctttaaggatcagtacattgggcgtggggatatgtggcgactg
aagaagagcttggtcagcacatgtgcctatatcactcaaaaggtggagtttgctgggata
cgggcacaagctggtgagctgtgggttaagagtgagaaggtcacatgtgggtacatcagt
gaggatacacgggtggtgttccgctcaacttcagccatggtttatatctttatccagatg
agctgtgaaatgtgggattttgacatctatggggacctgtactttgagaaagctgtgaat
ggtttcctttctgatctcttcaccaaatggaaggagaagaactgcagccatgaagtgaca
gtggttctattttctagaactttttatgatgcaaaatcaatagatgagtttcctgagata
catcgtgcctcaattcggcaggatcacgagggaagattttatgaagacttctacaaggtt
gtggttcagaatgagagacgggaagaatggacatcattgcttgtgactattaaaaaactc
ttcatccagtatcctgtgctggtgcggctggagcaggcagagggcttccctccaggttac
aattctacttcagcacaagggaactacctggaggccataaatctttctttcaatgtgttt
gacaagcattacataaaccggaactttgaccggactggacagatgtctgtggttatcaca
cctggtgtgggtgtgtttgaagtggaccggctccttatgatcctgaccaagcagcgtatg
atagacaatggtattggtgttgacttggtatgtatgggggagcaaccactgcatgctgta
ccactctttaagcttcacaatcgcagttgtcctggagattctcgcttgggagatgactac
aatattccacactggataaaccacagtttctacacatccaaaagccagctcctgtgtaac
agtttcactccacggatcaagctggcaggaaagaagtcactgattgagagggcgaaaaac
agcagagactcctcattgggggcacctaaggatgctgagaatgcccttcccatccaagtt
gattatgatggctatgatgcccaagtgttcaggcttcctggtccatccagagctcagcgc
tgtaccactttcaggtctgtaagggagagagagagtcgcaccaggaagagctctagttct
tatgatgtctcatcgagcccttccctgcagagtcgcactctgcccccagaggaggtgagg
agccaggcttctgatgacagctccctgggcaagatctccaacatcctgatgattccacga
cttcatctgcatcaatacgaagtcagcagctccttgggctacaccagcacccgagatgtt
cttgagaatatgctagagtctcagcagcgagactccagcgcgccagggaggttccatgta
ggcagcgcagaatccatgctgcacattcggcctggtggatatacaccacagcgtgcatta
ataaacccctttgcgccctctcgcatgcccatgaagcttacatccaacaggaggcgctgg
atgcacacatttcctgtgggtccatcgggagaagcaatccagatccaccaccagactcgc
cagaacatggcagaaatgcagggcaacgggcagcgggatttgacacactcctctgctgaa
ctgctggagcttgcttaccacgaggcaactggcaggcatatcgcttctcgtcatccaggt
gacagcatctcctgcttaacctttggtggagcagaggagttctcaaacagtttggtcaac
agcaacaatgcagggataaacatccggacccagaacaaggataccgtggaagatgctgtt
tccacttctccagatccgattctgacgctgtctgctccccccgtagtgccaggcttctgt
tgtacagttggggtggactggaaatctctcactactccggcatgcctccctcttaccacg
gactacttcccggaccgccagagtttgcagaatgactacactgagggctgctatgatctg
ctcccagaagctgacattgacaggagggatgaggaaggagtgcagatgacagcccagcag
gtatttgaggagttcatttgccagcgtctcatgcaaggatatcaaattattgtgcaaccc
aaaccacagaaaccagctaccactgtaccaccccctctcagcagcagccccctctacagc
cgaggcctcgtatcacgaaatcgacctgaggaagaagaccagtactggctgagcatgggc
cgcactttccacaaagtgaccctaaaggacaaaatcattactgtcactcgataccttcca
aagtatccatatgaatctgctcaaataaactacacatacagcctgtgcccttcccactcg
gactccgaatttgttttctgctgggtagagttctcccatgaacggttagaagaatacaaa
tggaattacctagatcagtatatctgctctgctggctctgaggacttcagtcttattgag
tcgctgaaattctggagaacacggttcctgctgcttccagcctgtataactgccacaaag
cgtattatggaaggcgaagtccactgtgatgtatatggagacaagccccgctctgatgag
gaggaatggcaactcttggatggcttcatccgctttgtggagggtttgaatcgtattcgt
cggcgccaccgatcagaccgaatgatcagaaaaggagcagccatgaagggtttgcagatg
gctggtccaatttccacccactctctggagcagcctggacctcctattgggaagaaagga
acctcagcactctctgccctgctggagatggaagccagtcagaagacattgggggagcag
caagcagcaatgcttgctgggaagagctctgcacaacctactgagagtgggagcattgcc
atcacacccacctacatggacagccctcgcaaggatggggccttctttatggagtttgtt
cgcagcccgcgcacagcttcaaccttctatccacaggtgtctgtagatcaaacagctcct
gctaccttagatggcagtacgttgataagcacaggccaatcagctgagaggtgcagtgcc
caggccctaggaagttcccagaatataggagaccaaggatatgctacaactggttcagct
gagaacagctcccagcagtgttctgtgaactcactaacttcttcatccactctgattgaa
attcttgaagccatgaagcatcccactacagggatccagctgctttccgaacagaaaggc
ctctccccatactccttcatcagtgctgaagttgtccattggcttgtgaacaatgtggaa
ggagcgcagactcaggcaatggctattgatatcatgcagaaaatgctggatgagcagttg
atcgtccatgcttccggagaggccttgcgcaccttcatctatgggttttatttttacaag
attgtcgttgataaagagccagacagagtaggtatgcagcagcctcccatgtggcacaca
gcagcaatggatgacttctctgccttccagaggaagtggtttgaggtggcatttgtggca
gaagaactcttgcactcagaaatcccagcattcctcctaccttggcttcccagccgtcca
gcctcctatgcaagtaggcacagttcctttagccgcagtttcggaggacggagccaggca
gctgcactattagctgccacagtgcctgaacaacgcacagtgacactggatgtcgatgtg
aataaccgcactgaccgcttggagtggtgcagctgttattaccatggcaatttctccttg
aatgctgccttcgagatcaaattacattggatggcagtgacagcagcagtcctttttgag
atggttcagggttggcatcggaaagccacttcctgtggcttcttgctggttccagtccta
gagggtccatttgcgttgcccagttacctgtatggagacccactccgagcacagctgttc
atcccactcaatgttagctgcttgttaaaggagggcagtgaacatctatttgatggtttt
gaacctgaaacttactgggatcgcatgcatctactccaggaggcaattgcatacagattt
ggatttgtgcaggataaatactcagcctctgcattcaactttccagccgagaacaagccc
cagtacatccatgtcacggggactgtgtttctgcagctgccttactccaagcggaaattc
tctgggcagcagcggcggcggcgcaactccaccagctcagccaatcagaacatgttctgt
gaggagcgtgtaggatacaactgggcctacaataccatgctgaccaaaacatggaggtcc
agcgccaccggggatgagaagttcgctgatcggttgctgaaggacttcacggacttctgt
tggaacaaagacaaccggcttgtccagttctggacagactgtctagataagatgcatgct
agtgcaccctga
DBGET
integrated database retrieval system
