Alligator mississippiensis (American alligator): 102561127
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Entry
102561127 CDS
T03087
Symbol
NVL
Name
(RefSeq) nuclear VCP-like
KO
K14571
ribosome biogenesis ATPase
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102561127 (NVL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amj03009
]
102561127 (NVL)
Ribosome biogenesis [BR:
amj03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
102561127 (NVL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Nucleolin_bd
AAA_lid_3
RuvB_N
AAA_5
AAA_16
AAA_22
AAA_14
AAA_2
TIP49
AAA_28
NPHP3_N
Mg_chelatase
RNA_helicase
nSTAND3
AAA_33
ABC_tran
NACHT
Viral_helicase1
AAA_17
AAA_3
TsaE
Vps4_C
Rad17
NB-ARC
Zeta_toxin
IstB_IS21
nSTAND_NTPase5
Parvo_NS1
DUF815
Sigma54_activ_2
AAA_18
Motif
Other DBs
NCBI-GeneID:
102561127
NCBI-ProteinID:
XP_014453583
UniProt:
A0A151P457
LinkDB
All DBs
Position
Un
AA seq
853 aa
AA seq
DB search
MRGRAAGSVDPRLKQRIRQYLISNKCGQYVDIGVIAADLQKTYSAEYGRRKRNAFRIQVE
KVFEIICSENESENLSALEDEHVAKRARHRREENENTESSMDELDDDYPEHPSQNHMNSS
LLTLYRKENPDSVPGTPKNELTETSTPVQVTAPQPSALTSGTPLETRISEGGWFIDKNPS
RKDVDFFTDLCEEGNEEKLISEKSKDFSLLESERRKTKGKRERRRKEDSQDVDGEIQSAL
RKQKAKSKGPELLHPSVKFEDVGGNDETLKEVCKMLIHVRHPEVYNHLGVVPPRGFLLHG
PPGCGKTLLAQAIAGELELPILKVAATEMVSGVSGESEQKLRELFEHAVSNAPCILFIDE
IDAITPKREVASKDMERRIVAQLLTCMDDLNNLPASAQVLVIGATNRPDSLDPALRRAGR
FDREICLGIPDEAAREKILQTLCRKLKLPESFDFHHLAHVTPGYVGADLMALCREAAMCT
VNRVLINSEGQKWKETEAGKAVSEQSIENGEVPVKRQPELVKDELQKLLELLKEQDPLVE
EQLQKLCIEMNDFIVALSSVQPSAKREGFVTVPDVTWADIGALEDIREELAMVILAPVRN
PEQFRALGLTAPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAV
RQVFQRARNSAPCVIFFDEVDALCPRRSDCEAGVSVRVVNQLLTEMDGLENRQQVFIMAA
TNRPDIIDPAILRPGRLDKTLYVGLPPPADRFAILKTITKDGTQPPLDTDVNLEAIAYDQ
RCDCYTGADLSALVREASLCALRQEMALQKSKSRKGEIKIGQKHFEEAFKKVKSSISKKD
QITYEELRQSLSR
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgcggggccgcgcggcaggctctgttgaccccaggctgaagcagcggatcagacagtat
ttaattagtaataaatgtggccagtacgtggacattggtgtgatagcagctgatttgcag
aaaacgtatagtgcagagtatggacgaaggaaaagaaatgcctttagaatacaggttgag
aaagtgtttgagataatctgtagtgagaatgaatctgagaatttatcagctttagaagat
gaacatgtagcaaaaagagcaagacacagacgagaagagaatgagaatacagaaagctcc
atggatgagttggacgatgattatccagaacatccatctcagaatcacatgaacagctcc
ttgttgaccttataccggaaagaaaatcctgattctgtcccaggaactccaaagaatgag
ctgacagaaacaagcacccctgttcaagtgacagcaccccaaccaagtgcccttacctct
ggaactcctcttgagaccagaatctctgaaggtggctggtttattgataaaaacccaagt
agaaaagatgtggactttttcactgacctttgtgaggaaggaaatgaagaaaaactgatt
tctgagaaatcaaaagatttctctcttttggagagtgaaagaaggaagacaaagggtaag
cgagaaagacgaaggaaagaggattcccaggatgtagatggtgaaatacaatccgcactg
cgtaagcagaaagctaaatctaaaggaccagagttgcttcacccttcagtgaaatttgaa
gatgtgggaggcaatgatgaaacgctgaaggaagtctgtaaaatgctgatacacgtacgt
caccctgaagtctacaaccacttaggtgtggtcccacctcggggatttcttttacatgga
ccaccaggatgtggaaagacactactagcacaggcaattgctggggagcttgaactacca
atcctcaaagtagcagctactgagatggtgtcaggagtgtcaggggaatctgaacagaag
ctgagagaattgtttgaacatgctgtgtccaatgcaccatgcatccttttcatagatgag
attgatgctatcaccccaaagagggaagttgcatcgaaagacatggagcgaagaattgtg
gcccagttactaacctgcatggatgatctgaacaatttgccggcttctgctcaggtccta
gtcattggagccactaacaggccagactcgctagatccagcactgaggcgagctggaaga
tttgatcgagaaatttgtctagggattcctgatgaagcagctagagaaaaaattctacag
acattgtgtcgaaaacttaagctccctgaatcttttgattttcatcacttggctcacgtg
actccaggctatgtaggtgcagatctgatggcactttgtcgtgaggcagccatgtgcaca
gtgaacagggtcctgataaattcagaagggcaaaaatggaaggagacagaggctggaaaa
gcagtgagtgaacaaagcattgaaaatggagaagtaccagtcaaaaggcagccagagctt
gtaaaggatgaattgcagaaactgctggaattgcttaaagagcaggaccccttggtagag
gagcagctgcaaaagctctgcattgagatgaatgattttattgttgcactgtcctcagtg
cagccctctgccaagagagaaggctttgtgacagttcctgatgtgacatgggcagatatt
ggagctctggaggacattcgggaggagcttgccatggttatactggcacctgttcggaat
ccagagcaattcagggctcttggcctgactgctccagctggtgtactacttgcagggcct
cctggatgtggcaaaacattactggccaaggctgtggcaaatgagtctgggctgaacttc
atctctgtaaaaggtccagaactgttaaatatgtatgtcggtgaaagtgagcgtgctgta
cgtcaggtatttcagagggccaggaattctgctccttgcgttatattttttgatgaagtg
gatgcattgtgtccccggaggtcagattgcgaggcaggtgttagtgttcgtgtggtgaac
cagttattaactgagatggatggtctggaaaatcgtcaacaggttttcattatggctgcc
accaacaggccagatataattgatccagcaatcttgcgacctggcagactggataaaaca
ctctacgtgggtttgccacctcctgcagatcgatttgccattttgaagactatcactaaa
gatggtactcagcctccactggacaccgatgtaaaccttgaagcaattgcttatgatcag
cgctgtgattgttacacgggggcagatctttctgctctagtgcgtgaagcttctctttgt
gccttgagacaagaaatggccttgcagaagagcaaaagcaggaaaggagaaatcaagatt
ggacaaaaacacttcgaagaagcttttaagaaagtgaaatcatcaatatcaaaaaaggat
cagataacatacgaagagctacgtcagtcactgagcaggtga
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