Alligator mississippiensis (American alligator): 102561135
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Entry
102561135 CDS
T03087
Symbol
HNRNPA1
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102561135 (HNRNPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102561135 (HNRNPA1)
03041 Spliceosome [BR:
amj03041
]
102561135 (HNRNPA1)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102561135 (HNRNPA1)
mRNA cycle factors
Common to processing body (P body) and stress granule
102561135 (HNRNPA1)
Spliceosome [BR:
amj03041
]
Common components
Common spliceosomal components
hnRNP proteins
102561135 (HNRNPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
102561135
NCBI-ProteinID:
XP_006278517
LinkDB
All DBs
Position
Un
AA seq
355 aa
AA seq
DB search
MERMEPRAGKKSPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRS
RGFGFVTYSSVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKE
DTEEHHLRDYFGQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHN
CEVRKALSKQEMASASASQRGRSSSGNFGGGRGGGFGGNDNFSRGGNFGSRGGFGGSRSG
GYGGSGDGYNGFGSDGYGSSGSGPGYSGGSRGYGGSSNYDSYNNGGGGFGGGSGGGNFGG
GGNYNDFGSYNSQSSNFGPMKGGSFGGRSSGPYGGGGYGGSSGGSGGSYGSGRRF
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggagcggatggagccgcgagcgggaaagaagtctcccaaggagcccgagcagctgcgc
aagctcttcatcggcggtctgagctttgagacgacagacgagagccttcgcagccacttt
gagcaatggggcacgctcaccgactgcgtggtgatgagggacccaaacaccaagcgttcc
aggggctttggatttgtcacgtactcctccgttgaagaagtcgatgccgccatgaacgcc
agaccgcacaaagtcgatggcagagttgttgaaccaaagagggctgtgtccagagaggac
tctcaaaggcctggtgctcacctaacagtaaagaaaatctttgtcgggggcatcaaggaa
gacacagaggagcaccatttgcgggactactttgggcaatacggcaagatcgaggtgatt
gagatcatgacagaccgcggcagtggcaaaaagcgaggttttgcctttgtcaccttcgat
gaccacgactctgtggacaaaattgtcattcagaaatatcacacggtcaacggccacaac
tgcgaagtgcggaaagccctgtccaagcaggagatggccagcgcctcagccagccagaga
ggacgcagcagctcggggaacttcggagggggccgcggaggtggatttggtgggaatgac
aacttcagccggggcggcaactttggcagtcgcggtgggtttggtggcagccgcagtggt
ggctatggaggcagtggagacggctataatggatttggcagcgacgggtatggcagcagt
ggcagcggccctggctactctggaggcagcagaggctacggcggcagcagcaactacgac
agctacaacaatggtggtggcggctttggcgggggcagcggaggcggcaactttggcggc
ggtggcaactacaatgacttcggcagttacaacagccaatcctctaactttggccctatg
aaaggaggcagctttggaggcaggagctctgggccgtatggcggcggcggctacggtggc
tccagtggtggcagtggtggcagctacggcagcggccggcggttttaa
DBGET
integrated database retrieval system
