Alligator mississippiensis (American alligator): 102561214
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Entry
102561214 CDS
T03087
Symbol
RLIM
Name
(RefSeq) ring finger protein, LIM domain interacting
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amj04121
]
102561214 (RLIM)
Enzymes [BR:
amj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102561214 (RLIM)
Ubiquitin system [BR:
amj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102561214 (RLIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING-like
zf-RING_16
zf-RING_4
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
102561214
NCBI-ProteinID:
XP_014462693
LinkDB
All DBs
Position
Un
AA seq
598 aa
AA seq
DB search
MESSDSNDKGNIDQSEAQRRSQLDRLDREEAFYQFVNNLSDEEYRLMRDNNLLGTPGEIT
EEELLRRLHQIKEGPPQQNSDENRGAESTEDVSNGDSIIDWLNSVRQTGNTTRSGQRGNQ
SWRAVSRTNPNSGDFRFSLEINVNRNNGNTNSETENEPSVEPSNGEDLENSQSDSETPRS
ESPSGGQTASERNTSEELATEEAPSHRGQRRARSRSPEQRRTRARTDRSRSPINPVSEVP
RRSHHNTSSQTFDHSPVNEAEGSSRTRQHVTLRQHSTGTEMPSESAALFSTPEARPVPQA
AGSSETNASGESAAPGQRPPTIVLDLQVRRVRPGEYRQRDSIANRTRSRSQTPNNTVTYE
SERGGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGFSETTSVAIQTMLRQIMTGFGELS
YFMYSDSDADPSGPAPNQSGDAAEPPNGGGTGGGGSSSEGTDASSGEVYEGSNEGGSTSG
ARREGRNTRGSVTFEESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLTMRNFGESDA
LKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRESVV
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggaaagctcagattctaatgataaaggaaatattgatcaatcagaagctcagcgtcgt
agtcagctggatcgattagatcgggaagaagctttctatcagtttgtcaataacctgagt
gacgaggagtacaggcttatgagggataacaatttgctaggaactccaggtgaaattact
gaagaagagttgctgagaaggctacaccaaattaaagaaggtccaccacagcaaaacagt
gatgagaatagaggtgcagaatccactgaagatgtatctaatggagattccatcatagac
tggcttaattctgtccgacagactggaaatacaacacgaagtgggcaaagaggaaaccag
tcttggagggcagtgagccggactaaccctaacagtggtgacttcaggttcagtttggaa
ataaatgttaaccgtaataatgggaacaccaattcagaaactgaaaatgagccatctgta
gaaccttccaatggggaggatttggaaaacagccaaagtgactctgagacccctcggtct
gaatcgccatcaggagggcagactgcatctgaaaggaatacctctgaggaattggcaaca
gaggaagctccttcacacagaggtcagagaagagcaagaagtaggagcccagagcagagg
agaacacgagctaggactgatagaagtaggtcacctattaatccagtgagtgaggttcct
cgcagatctcatcataatacgtcatctcagacatttgatcattccccggtaaatgaagct
gagggaagttctagaactagacagcacgtgacgttaaggcagcattcgacagggactgag
atgccaagtgaaagcgcagctctgttttcaacccctgaagcaagacctgttcctcaagct
gctggttcttcagaaactaatgccagtggtgagtctgcagctcctggacagaggcctcct
actatagtccttgatcttcaagtaagaagagttcgcccaggagagtatcggcagagagac
agcatagccaaccgaactcggtcgaggtcccagactccaaacaacacagtcacttatgaa
agtgaacggggagggtttaggcgcacattttcacgttcagaacgggctggagtgagaact
tacgtcagtaccattaggattcctattcgtagaatcttaaacacaggctttagtgagact
acatcagtcgcgattcagaccatgctaaggcagatcatgacaggctttggagagttgagt
tactttatgtacagtgatagtgatgcagatcctagtggcccagccccgaatcaaagtgga
gatgctgctgagccaccaaatggaggaggaacaggtggtggtggttcgagtagtgaaggt
actgatgctagctcaggggaagtctatgaaggtagtaatgaaggaggttccacatccggt
gctagacgggaaggtcggaataccaggggttcagtcacttttgaagaaagtggttctcta
ccattccttagcctagcacagtttttcttactaaatgaggatgatgatgaccagccgaga
ggactcaccaaagaacaaatcgacaacctgacaatgaggaattttggtgaaagcgatgcc
ctgaaaacctgtagcgtctgtattacggaatacacagaaggcaacaaacttcgtaaactg
ccttgttcccacgagtatcatgtccactgcattgaccgctggttatcagaaaattccact
tgtcctatttgtcgcagagcagtcttagcttctggtaacagagaaagcgttgtctaa
DBGET
integrated database retrieval system
