Alligator mississippiensis (American alligator): 102561289
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Entry
102561289 CDS
T03087
Symbol
LRRC4C
Name
(RefSeq) leucine rich repeat containing 4C
KO
K07523
netrin-G1 ligand
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102561289 (LRRC4C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
amj04515
]
102561289 (LRRC4C)
Cell adhesion molecules [BR:
amj04515
]
Immunoglobulin superfamily
NGL family
102561289 (LRRC4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
LRR_1
LRR_14
V-set
Ig_2
LRR_9
LRR_LRWD1
Ig_6
Sp38
Syndecan
Motif
Other DBs
NCBI-GeneID:
102561289
NCBI-ProteinID:
XP_019332744
LinkDB
All DBs
Position
Un
AA seq
637 aa
AA seq
DB search
MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICVRKNLRDVPDSISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLVKLDELDLSGNHLSAIRPGSFQ
GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLRLERIHLHHN
PWNCNCDILWLSWWIKDKAPSNTACCARCHTPPNLKGRYIGELDLNYFTCYAPVIVEPPA
DLNVTEGMAAEMKCRASTSLTSVSWITPNGSVMTHGAYRVRISVLSDGTLNFTKVTVQDT
GLYTCMVSNSVGNTTASATLNVTAVENGYTYFSTVTVETVEPSQDEARTTEQVGPTPVTD
WETTNMTTSLTPQSTRSTEKTYTIPVTDPNNGIPGIDEVMKTTKIIIGCFVAITLMAAVM
LVIFYKMRKQHHRQNHHAPTRTVEIINVDDELTGDTPIESHLPMPAIEHEHLNHYNSYKS
PFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttacatccacagcagataatgataggtcctaggtttaacagg
gccctatttgaccccctgcttgtggtgctattggctcttcaactacttgtggtggctggt
ctagtaagggctcaaacttgcccttctgtctgctcctgcagcaaccagttcagcaaagtg
atctgcgtgcggaagaatctgagagatgtcccagacagtatctctaccaacacacgatta
ctgaatcttcatgagaaccagattcaaatcattaaggtgaatagtttcaaacatctgagg
cacctagaaatcttgcagctaagcaggaatcacattagaacaattgaaataggggccttc
aatggtctggccaatctcaacactttggaactctttgacaatcgtcttaccaccatccct
aatggggcttttgtatacctgtcaaaactgaaggagctttggttgagaaacaacccaatt
gagagcatcccttcttatgcttttaacagaatcccttccctgcgtaggttggatttgggt
gaattgaaaaggctttcatacatctcagaaggtgcctttgaaggtttgtctaatttgaga
tatttgaaccttgccatgtgcaaccttcgggagatccctaaccttacaccgcttgtaaaa
ctggatgagctagatctttctgggaaccatctatctgccatcaggcctggatccttccaa
ggattaatgcatcttcaaaaattgtggatgatacaatcccagattcaagtgattgaacgg
aatgcctttgataaccttcagtcactggtagagatcaatctggcacacaacaatctcacg
ctactgcctcatgaccttttcacaccactccgactagaaaggattcacctgcaccacaat
ccttggaactgcaactgtgacattctttggctcagttggtggattaaagacaaagcaccc
tccaacactgcatgctgtgcccgttgccacacacctcctaacttgaaaggaaggtacatt
ggtgagctggacctgaattacttcacgtgctatgctccagtgatagtggagccaccagca
gacctcaacgtcacagaaggcatggctgcagagatgaaatgccgagcatcgacctctctg
acttctgtatcttggattactccaaatggatcagttatgacacatggggcatacagagtt
cggatttctgtgcttagtgatggcacattaaattttacaaaggtgaccgtgcaagacacg
ggcttgtatacatgcatggtgagtaactctgttggaaataccacagcttctgccacgctc
aatgtgactgcagtggaaaatggttacacatacttttcaactgtcacagtagagactgtg
gaaccttctcaggatgaggcacggaccacggagcaggtcgggcccacgccagttactgac
tgggagaccaccaacatgacaacctctctcactccacagagcacaaggtcaacagaaaaa
acgtacaccatcccagtgacggacccaaacaatgggattccaggaatagatgaggttatg
aagactaccaaaatcataattggttgttttgtggctatcaccctcatggctgctgtgatg
ctggtaattttctacaaaatgaggaaacagcatcaccggcagaaccaccatgctccaaca
aggactgtagagattattaatgtggatgatgagcttacaggtgacacacccatagagagt
catttgcccatgccagcaatagagcatgagcacttaaatcactataactcttataagtct
cctttcaaccacacaacaacagttaacacaataaattcaatacacagttcagtgcatgaa
ccgttattgatccgaatgaactctaaagacaatgtacaagagactcagatctga
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