Alligator mississippiensis (American alligator): 102561328
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Entry
102561328 CDS
T03087
Symbol
TOP3B
Name
(RefSeq) topoisomerase (DNA) III beta
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03440
Homologous recombination
amj03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102561328 (TOP3B)
03460 Fanconi anemia pathway
102561328 (TOP3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amj03032
]
102561328 (TOP3B)
03400 DNA repair and recombination proteins [BR:
amj03400
]
102561328 (TOP3B)
Enzymes [BR:
amj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
102561328 (TOP3B)
DNA replication proteins [BR:
amj03032
]
Eukaryotic type
DNA Topoisomerases
102561328 (TOP3B)
DNA repair and recombination proteins [BR:
amj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
102561328 (TOP3B)
FA (Fanconi anemia) pathway
102561328 (TOP3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
102561328
NCBI-ProteinID:
XP_006269379
UniProt:
A0A151NRS9
LinkDB
All DBs
Position
Un
AA seq
862 aa
AA seq
DB search
MRAVLMVAEKPSLAQSIARILSRGNMTSRKGLNGACSVHEYGGSFAGQSAHFKMTSVCGH
VMTLDFIGKYNNWDKVDPAELFSKAPTEKKEANPKLTMVKFLQVEGRGCDSIVLWLDCDK
EGENICFEVLDAVLPVMNKPRGSERTVYRAKFSSITDTDICNAMNNLGEPNRNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPEPY
WVLQAKVNHEKESSLTLEWDRVRVFDREIAQMFLNITKLAKEAKVESVSKKEKVKQRPLA
LNTVEMLRVASSALGMGPQHTMQIAERLYTQGYISYPRTETTHYPENFDLKGALRQQANN
PYWAETVKALLSEGINRPRKGHDAGDHPPITPMRAASEAELGGDGWRLYEYIARHFIATV
STDCKYLQTTISFSIGPEHFTCIGKMVTSPGFTEIMPWHSIPLEESLPSCERGDIYPISE
IKLLEKQTNPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRRLKPTNL
GIVLVHGYYKIDAELVLPTIRSAVEKQLNLISLGKANYHQVLEHTLDIFKRKFHYFVDSI
AGMDELMEVSFSPLADTGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDETYSLPQNGTIKL
YKELRCPLDDFELVLWSSGSRGKSYPLCPYCYNHPPFRDMKKGMGCNECTHPTCQHSLSM
LGIGQCVECENGVLVLDPTSGPKWKMACNKCNVVVHFFENAHKVRVSPETCEVCDAALVD
VDFNKAKSPLPGDETQHSGCVFCDPVFQDLVELKHAAMRHPMHRGGQGKRQGRGRGKGRR
LGGRPNPKKPKDKMAALAAYFV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgcgggccgtgctgatggtggccgagaagccgtccctggcgcagtccatcgccaggatc
ctgtcgagaggaaacatgacgtcccgcaaagggctgaacggcgcctgctcggtgcacgag
tacggcgggtccttcgccgggcagagcgcccacttcaagatgacatccgtgtgcggccac
gtgatgacgctggacttcataggcaaatataacaactgggacaaagtggatccagcagaa
ctttttagtaaagcaccaacagaaaagaaagaagctaatcccaaattgactatggtgaaa
tttttacaggtggaaggaagaggttgcgactccatcgttttgtggctggattgtgataag
gaaggggaaaacatctgctttgaggttcttgatgctgttcttcctgttatgaataaacct
cgtggctctgaaaggacagtttaccgagctaagttcagttctattactgacaccgacatc
tgcaatgccatgaacaatttgggagaacccaatcgcaatgaggccctgtcagttgatgcc
cgccaggagttagatctgagaattggctgtgcatttacaagatttcagactaaatatttt
caggggaaatatggcaatttggacagctccctcatctcttttgggccatgtcagaccccc
acacttggattctgtgttgaaaggcatgataaaatccagtcctttaaacctgaaccttac
tgggtgctgcaagccaaggtgaaccatgaaaaagaaagctctcttactctggagtgggat
agagtgagggtatttgatcgagagatagcccagatgttccttaacataacaaagctagca
aaagaggcaaaggtagaatctgtgagtaagaaggagaaagtgaagcagagacctctggca
ctgaacacagtagaaatgctgcgagttgccagttctgctttgggaatgggtccacagcac
accatgcaaatagcagaacgactttatacccaagggtatattagctaccctcgaacagaa
actactcactatccagagaactttgacttgaaaggagctttgagacaacaagccaataat
ccctactgggcagaaacagtaaaagcattgctatcggaaggtattaatcgtccaaggaaa
ggtcatgatgcaggggaccatcctccaataactccaatgagagctgcatcagaagcagag
ttaggtggagatggatggcgattatatgaatatattgccaggcatttcattgctactgtc
agcactgactgcaaatacctccagaccaccatatcttttagtattggtcctgaacatttt
acatgtataggaaaaatggttacttcacctgggtttacagagattatgccatggcacagc
atcccattagaggagagcctacccagctgtgagagaggagatatttacccaatcagtgag
ataaaactgctggagaaacagactaatccgcctgattacctgactgaagcggaactcatc
acgctgatggaaaaacatggcattggaactgatgcaagtattccagtccacattaacaac
atttgccagcgaaactatgtcacagtggagagtggccgcagactaaaacctacaaacctt
ggcatcgttctggttcacgggtactacaaaatagatgcggaactggtgcttcctacgatc
cgcagtgcagttgagaagcagctcaatttgatatctttgggcaaagccaattatcaccag
gtcctggagcatacccttgatatcttcaaaaggaagtttcactattttgttgattctatt
gcaggtatggatgaattgatggaagtgtctttctcgccattagccgacacaggcaaacct
ctttcccgttgtggcaaatgccatcgttttatgaagtacatccaggccaagccaagtcgt
ctgcactgctctcactgtgatgaaacatacagccttccgcagaatggtactatcaagctc
tacaaagagttgcgttgtcccctagatgactttgagctggtgctgtggtcttctggatcc
agaggaaagagttacccactctgtccgtactgttacaaccatccccccttcagggacatg
aaaaaaggaatgggctgtaatgaatgcactcaccccacatgccagcactcgctgagcatg
ctaggaattgggcagtgtgtggaatgtgagaatggggttctggtgctggacccaacttca
ggtcccaagtggaagatggcctgcaacaaatgcaatgtggttgtgcacttctttgagaat
gcccacaaagtccgagtatcaccagagacctgtgaggtgtgcgatgcagctcttgtggat
gtggattttaataaagccaagtctcctcttcctggggatgagacacagcattcaggctgt
gtattctgtgaccctgtgtttcaagatctggtggagctgaagcatgcagccatgaggcac
cctatgcaccggggaggccaggggaaaaggcagggtcgaggaagagggaagggcagaagg
cttggagggagacccaatccaaagaaacccaaggacaagatggcagccctagctgcttac
tttgtatga
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