Alligator mississippiensis (American alligator): 102561389
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Entry
102561389 CDS
T03087
Symbol
GATAD2B
Name
(RefSeq) GATA zinc finger domain containing 2B
KO
K23194
transcriptional repressor p66
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102561389 (GATAD2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
102561389 (GATAD2B)
03036 Chromosome and associated proteins [BR:
amj03036
]
102561389 (GATAD2B)
Transcription factors [BR:
amj03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
102561389 (GATAD2B)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
102561389 (GATAD2B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
P66_CC
GATA
FAM76
LIM
DUF4004
DUF4603
Spc29
zf_Tbcl_Rhp7
Motif
Other DBs
NCBI-GeneID:
102561389
NCBI-ProteinID:
XP_006264398
LinkDB
All DBs
Position
Un
AA seq
591 aa
AA seq
DB search
MDRMTEDALRLNLLKRSLDQADDRDDVLAKRLKMEGHEAMERLKMLALLKRKDLSGIDVP
HELPVKQDGVKVYEEKLNGSLRPHADVRTAGRPGKENINDEPVDMSARRSDQDRGRLTPS
PDIIVLSDNEASSPRSSSRMEERLKAANLEMFKGKSLEERQQLIKQLRDELRLEEARLVL
LKKLRQSQLQKENVVQKTPVVQNAASIVQPSPAHVGQQGLSKLPSRPGAQGVEPQNLRTL
QGHSVIRSATNTTLPHMLMSQRVIAPNPAQLQGQRVPPKPGLIRTTTPSMNPAINYQPQS
SSSVPCQRTSSSAIYMNLASHIQPGTVNRVSSPLPSPSALNDAANSQAAAKLALRKQLEK
TLLEIPPPKPPAPLLHFLPSAANSEFIYMVGLEEVVQSVIDSQGKSCASLLRVEPFVCAQ
CRTDFTPHWKQEKNGKILCEQCMTSNQKKALKAEHTNRLKNAFVKALQQEQEIEQRLQQQ
AALSPTATPAVSSVSKQENIMRHHTLRQAPQPQSTLQRGIPTSARSMLSNFAQGPQLSVA
GGLLGMPGVNIAYLNAGIGGHKASSLADRQREYLLDMIPPRSISQSISGQK
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggacagaatgacagaagatgccctgcgtctgaaccttttaaagcggagtttggaccaa
gccgatgaccgggacgatgttctggccaagaggttgaaaatggagggccatgaggccatg
gagcgcctcaaaatgctggccctactgaagcgcaaggacctatcaggcattgacgtcccc
catgagctcccggtgaagcaggatggggtgaaagtatatgaagagaagctgaatgggagc
ctgaggccccatgcagatgtcaggactgcagggaggccggggaaggagaacattaatgat
gagccagtggacatgagcgcaaggagaagtgaccaggacaggggtcggttaaccccctca
ccagacataattgtcctttccgataatgaagcatcaagtccccgttccagctctcggatg
gaagaaagactcaaggcagcaaatctcgaaatgtttaagggtaaaagcctagaggagcgg
cagcagctcatcaagcagctccgggatgaactgcggctggaagaggcgaggctggtgctg
ctgaagaagctgaggcaaagtcagctgcaaaaggagaatgttgtacagaagactcctgtt
gtccagaatgcggcatctattgtccagccatcgcctgctcatgtggggcagcagggactg
tccaagcttccctccaggcctggagctcagggggtcgagcctcagaatttaagaacattg
cagggtcacagtgtcattaggtctgccacaaacacgaccctccctcacatgctgatgtcg
cagcgtgtgattgctccaaaccctgcccagttacagggtcagcgcgttcctccaaaacct
ggcctcatccgcactacaactccaagcatgaatccagccatcaactaccagccgcagtcc
agttcttctgttccttgccagcgcacgtcgtcttcagccatctacatgaaccttgcctct
cacattcagcccgggaccgtgaacagggtctcgtctccgctgcccagccccagtgctctg
aacgacgctgccaactcgcaggctgctgccaagcttgccctgcgcaagcagctggaaaag
acgctgctggagattccacccccaaaaccaccagcgcccttgctgcacttcctgcccagt
gcggccaacagtgagttcatctacatggtgggactggaggaggtggtgcagagcgtcatc
gacagccaagggaaaagctgcgcctcccttctgcgcgtggagccctttgtgtgtgctcaa
tgccgcacggatttcaccccgcactggaagcaagagaagaatgggaagatcctgtgtgag
cagtgcatgacctccaaccagaagaaggcgctgaaagcagagcacaccaaccggctcaag
aacgccttcgtgaaggccctgcagcaggagcaggaaatcgagcagaggctgcagcagcag
gcggccctgtcccccacagccacacctgctgtgtccagtgtcagcaagcaggaaaacatc
atgaggcaccatacgctccgacaggccccgcagccccagagcactttgcagcgtggcatc
cccacatctgcccgctccatgctttctaactttgcccagggcccccagctctctgtggca
ggtggtcttcttggtatgccaggtgttaacatcgcttacctgaacgccgggattggaggt
cacaaagcgtcgagcttggcggatcggcagcgggagtatcttttagatatgatcccaccc
cggtctatatcgcagtccatcagcggacagaaataa
DBGET
integrated database retrieval system
