Alligator mississippiensis (American alligator): 102561414
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Entry
102561414 CDS
T03087
Symbol
RXRB
Name
(RefSeq) retinoid X receptor beta
KO
K08525
retinoid X receptor beta
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03320
PPAR signaling pathway
amj04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
102561414 (RXRB)
03320 PPAR signaling pathway
102561414 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
102561414 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
amj03310
]
102561414 (RXRB)
Transcription factors [BR:
amj03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
102561414 (RXRB)
Nuclear receptors [BR:
amj03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
102561414 (RXRB)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
102561414
NCBI-ProteinID:
XP_019348295
LinkDB
All DBs
Position
Un
AA seq
449 aa
AA seq
DB search
MGDSDRDCRSPDSSSLSSSPPPPPEPPAPLPPSMIGAAMTSALGSPGASLGSPFPVISSS
MGSPGLPATPAVGYGPVSSPQINSTVNLSGLHSVSSSDDVKPPLGMRGVPCHPHGGMMPG
KRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDNKDCVVDKRQRNRCQYCR
YQKCLATGMKREAVQEERQRGKEKEGDNELGASANEEMPVEKILDAELAVEQKSDQSVDG
SASGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASF
SHRSISVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAI
ILFNPDAKGLSNPGEVELLREKVYASLESYCKQKYPEQQARFAKLLLRLPALRSIGLKCL
EHLFFFKLIGDTPIDTFLMEMLEAPHQLS
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggagacagcgaccgcgactgccgcagcccggacagctcgtcgctcagctcgtcgccg
ccgcccccgccggagcccccggccccgctgccgccctccatgatcggtgcggccatgacc
tccgccctgggctcgcccggcgccagcctcggctcccccttccccgtcatcagctcctcc
atgggctcccccggcctgcccgccacgcccgccgtcggctacgggcccgtcagcagcccg
cagatcaactccacggtgaacctgtcagggctgcactcggtgagcagctcagatgacgtg
aagccgccgttgggcatgcggggggttccctgccacccccacggtggcatgatgcctggg
aagcgcctctgcgccatctgtggggacaggtcatcaggtaagcactatggcgtgtacagc
tgtgagggctgcaagggtttcttcaaacggacgatccgcaaggacctgacctatacgtgc
cgggacaacaaggactgcgtggtggacaagcgccagcgcaaccgctgccagtactgccgc
taccagaagtgcttggccaccggcatgaagcgcgaagcggtgcaggaggagcggcagcgg
ggcaaggagaaggagggggacaatgagctgggggccagcgccaacgaggaaatgccagtg
gagaagatcctggacgctgagctggctgtggagcagaagtcggaccaaagcgtggacggg
tcggccagtggcggcagctcgcccaatgacccggtaaccaacatctgccaagcagccgac
aagcagctgttcacgctggtggaatgggccaagcgcatcccccacttctctgagctgccc
ctggacgaccaggtcatcctgctgcgggccggctggaacgagctgctgatcgcgtcattc
tcgcaccgctccatctcggtgaaggacggcatcctcctggccacagggctgcacgtgcat
cgcaacagtgcccacagcgccggtgtcggtgccatctttgacagggtgctgacggagctg
gtgtccaaaatgcgggacatgcgcatggacaagacggagctgggctgtctgcgcgccatc
atcctcttcaacccagacgccaaggggctgtcaaacccgggggaggtagagctgctgcgg
gagaaggtgtatgcatcgctggagtcctactgcaagcagaagtacccggaacagcaggca
aggtttgccaagctgctgctgcggctgccagccctgcgctccattgggctgaagtgcctg
gagcacctcttcttcttcaagctcatcggggacacccccatcgacaccttccttatggag
atgctcgaggccccccaccagctctcctga
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integrated database retrieval system
