Alligator mississippiensis (American alligator): 102561430
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Entry
102561430 CDS
T03087
Symbol
SRCAP
Name
(RefSeq) helicase SRCAP
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102561430 (SRCAP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amj03036
]
102561430 (SRCAP)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
102561430 (SRCAP)
SWR1 complex
102561430 (SRCAP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
TetR_C_7
Cas3_HD
AAA_14
DUF2526
Motif
Other DBs
NCBI-GeneID:
102561430
NCBI-ProteinID:
XP_019338365
LinkDB
All DBs
Position
Un
AA seq
1808 aa
AA seq
DB search
MQSSPPRQHPALHTETAPDRMTGSNPVSPASSGSPASSGSVSPPCLARDAPLEAALGFDV
PKAPGRGLVAPGPCTADPGSMWDKTHAEIAEQAKHEAEIENRIAEMKKEGFWSLRRLSKV
PEPARPKVHWDYLCEEMQWLSADFAQERRWKRGVARKVVRMVIRHHEEQRQKEERARREE
QAKLRRIASSIAKEVKQFWTNVEKVVQFKQQSRLEEKRKKALDLQLDFIVGQTEKYSDLL
SQSLNETLPVASKASSSSHPGSSRAGSAASSPLPPARLPEDEDGDFQPHEESDDEETIEV
EEQQEGNDSETRRREIELLKQEGELPLEELLQSLPPQILENSCSPGPSASSSSADDGDTD
EDEAQGDTNEEEEEEEMEKPKPMIQRNKKPWKPDEEFTANEDEAEDEEETIDAEEELEGT
VDHKQELDDLAREGELPVEELLEKYAGAYASDFEPDASESSSEASTSEYEQESDEESSSQ
ADSPAEESEEEESEEEEEEEEVVAAPEEVQAGQEEDFGVEYLLRGDEERGGQGADPAGPP
STLGPKKEITDIAATAESLQPKGYTLATTQVKTPIPCLLRGTLREYQHIGLDWLVTMYEK
KLNGILADEMGLGKTIQTISLLAHLACEKGSWGPHLIIVPTSVMLNWEMEIKRWCPSFKI
LTYYGAQKERKLKRQGWTKPNAFHICITSYKLVLQDHQAFRRKNWKYLILDEAQNIKNFK
SQRWQSLLNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMI
EGSQEYNESLVKRLHKVLRPFLLRRVKVDVEKQMPKKYEHVIKCRLSKRQRFLYDDFMAQ
ATTKETLATGHFMSVINILMQLRKVCNHPNLFDPRPIHSPFITQGICYTTASLVLTALDH
HPFKHVDMGMFDLINMEGRVSRYETDTFLPKWKVTRKLIEEIAESPDPPPRPKPVKMKVN
RMLQPSAKPENRTVVLVNSPRPPAPPQRPLLPEGMAPLPITTHLPLQPLGPMLPGPVQPP
TLPHPLSVATSLPLPAGPVLPPARPPAPPLGPPLGQNSAAITATMLQAPTPTPQVLPTPM
PVATQLAPTAPRPPVAPTPMPGPALKPGPAPAPGVRLAGAPLGPGGIMKPMTVQSSATAL
PAYSLATTGPVQPPRLLLSPDMQARLPSGEVVSIAQLASLASRPLQSAPGSKPLTFQLQG
NKLTLTGTQVRQVAVAQPRQLPRNVVHLVSAGGQHHLISQPAQVALIQAMAQPGGQAMPG
HPPTAILPAPAPAPPATSAALSVPIAATQVPSSMVNSSGVVKIVVRQAPRDGLAPALQPP
TPPPPRPPPTATAAATPLPGLPAALVAPRAPLPVAPVPPSRLPAPPLVPMRGPAPLQALV
RPVMRVVPAPAIDLPAPMPVPTMSPAPVGPLPAAPTPLSAPRPLLPASPSPVPKEEPEML
TLRSSPPTPPPPSAPVSRPRRQPPPPPRSPFYLESLEEKRKRQKEERLARLFRLNEQHCA
LAPVYGTEVLRLCSLFPPTTHDPEAEAEPKAPGGGWRGAGYAHCYMAQMQRDPQRLAEYW
QQAPALSRAILTPQQRIEQLEDIIERFIFVLPPVEVPPVALHTSHPPPTLRLRHQALAAA
LRRELSPRARALHRVVCNMRTQFPDLRLIQYDCGKLQTLDLLLRQLKAEAHRVLIFTQMT
RMLDVLEQFLNYHGHIYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLTG
ADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRCPGTLPAPTPRQGSPGIQAPGPPA
RNPQSPST
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcagtcctccacggcagcacccggcactgcacacagagacggcgccagacaga
atgacggggagcaacccggtgtcaccggcctcgtcgggctccccggcctcaagtggcagc
gtgtcaccaccctgcctagcccgcgacgcccctctggaggcggccctgggcttcgatgtg
cccaaggcgccaggccgcggcctggtggcacccgggccctgcactgccgacccgggcagc
atgtgggacaagacccatgccgagatcgccgagcaggccaagcatgaggcggagatcgag
aaccgaatcgcagaaatgaagaaggaaggcttctggtccctgaggcgcctctccaaggtg
cctgagccagcccggcccaaggtgcactgggactacctgtgcgaggagatgcagtggctc
tcggccgactttgcccaggagcgtcgctggaagaggggcgtggccaggaaggtggtgcgg
atggtgatccggcaccacgaggagcagaggcagaaggaggagcgggcccggcgggaggag
caggccaagctgcggcgcatcgcctcctccatcgccaaggaggtcaagcagttctggaca
aatgtggagaaggtggtgcagttcaagcagcagtcgcgcctggaggagaagcgcaagaag
gcgctggacctgcagctggacttcatcgtgggccagacggagaagtactcggacctactg
agccagagcctcaatgagaccctgcctgtagccagcaaggccagctcatcttcccaccca
ggctcatcccgcgctggctcggctgcctcaagccccctgccccctgcccgcctccctgag
gatgaagatggcgacttccagccccacgaggagtcagatgatgaggagacaatcgaggtg
gaggagcagcaggaaggcaacgactcggagacacggcggcgggaaatagagctgctcaag
caagaaggcgagctgcccctggaggagctgcttcagtccctgcccccccagatactggag
aactcctgcagtcctggcccctcagcctccagctccagtgctgacgacggggacacagat
gaggatgaggcccagggggatacgaatgaggaagaggaggaggaagagatggaaaagccg
aagcccatgatccagaggaacaagaagccgtggaagccagacgaggagttcacggccaac
gaggatgaagctgaggatgaggaggagacgattgatgctgaggaggagctggaagggacc
gtggatcacaagcaggagctggatgacctggcacgggaaggtgagctgcccgtggaggag
ctgctggagaagtatgcgggggcctacgcctcagactttgagccagatgcctcggagagc
tcctcggaggccagcacctcggagtacgagcaggagtcggatgaggagagcagcagccag
gccgactcgccggcagaggagagcgaggaggaggagagtgaggaagaggaggaggaagag
gaggtggtggccgccccagaggaggtgcaggctggccaggaggaagacttcggtgtggag
tacctgttgcggggtgatgaggagcggggcgggcagggggctgaccctgctggccccccc
tccacccttgggcccaagaaggagatcactgacatcgctgccacagctgagagcctgcag
cctaagggctacaccctggccaccacccaggtgaagacacccattccttgcctgctgcgg
ggcacgctgcgggagtaccagcacattggcctagactggctggtcaccatgtacgagaag
aagctcaacggcatcctggccgatgagatgggactgggcaagaccatccaaaccatctcc
ctgctggctcacctggcctgcgagaaggggagctggggtccccacctcatcatcgtaccc
accagtgtcatgctgaactgggagatggagatcaagcgctggtgccccagcttcaagatc
ctcacctactacggggcgcagaaggagcgcaagctcaagcggcagggctggaccaagccc
aacgccttccacatctgtatcacgtcctacaagctggtgctgcaggaccaccaggccttc
cggcgcaagaactggaagtacctcatcctggatgaggcccagaacatcaagaacttcaag
tcccagcgctggcagtcgctcctcaacttcaacagccagcggcgcctgctcctgacagga
acgcccctgcagaacagcctcatggagctgtggtccctcatgcacttcctcatgccccac
gtcttccagtcccaccgggagttcaaggagtggttctccaacccgctgacgggcatgatt
gaggggagccaggagtacaacgaaagccttgtcaagaggctgcacaaggttctacgcccc
ttcctgctgcggcgggtgaaggtggacgtggagaagcagatgcccaagaagtacgagcat
gtcatcaagtgccgcctgtccaagcgccagcgcttcctctatgacgacttcatggcccag
gccaccaccaaggagacgctggccacggggcacttcatgagcgtcatcaacatcctgatg
cagctgcgcaaggtctgcaaccacccaaacctcttcgacccacggcccatccactccccc
ttcatcacccagggcatctgctacaccaccgcctccctcgtcctcactgccctcgatcac
caccccttcaagcacgtggacatgggcatgtttgacctgatcaacatggagggccgggtg
tcacgctacgagaccgacactttcctgcccaagtggaaggtgacgcgcaagctcatcgag
gagattgctgagtcccccgaccccccaccccggcccaagcccgtcaagatgaaagtcaac
aggatgctgcagccatcagccaagccggagaaccgcacggtggtgctagttaacagcccg
cggcccccagccccgccacagcgccccctgctacctgagggcatggctccactacccatc
accacccatctgcccctacaacctctgggccccatgttgccggggcctgtgcagccaccc
accctgccccacccattgtccgtcgctacctccctgcccctccctgcggggccggtgctg
ccccctgccaggcccccagccccaccattggggccaccactaggccagaacagcgccgcc
atcacagccaccatgctccaggcacccactcctaccccacaagtgcttcccacaccgatg
cccgtggccacccagctggcacctacggcacctcggccgcctgtggcacccacgcccatg
cccggtcctgccctgaagccaggcccagcccctgcccctggagttcggctggcgggtgcc
cccctggggcccggcggcatcatgaagcccatgactgtgcagtccagtgccactgcgctg
cctgcctacagcctggccaccaccggacctgtgcagccgccgcgtctcctgctctctccc
gacatgcaggcccgtctgccctccggtgaggtagtaagcatcgcacagctggcttcgctg
gccagccgacccctgcagagcgcaccgggcagcaagccccttactttccagctgcagggc
aacaagctgacactgacgggcacccaggtgcgccaggtggctgtggcccagccccgccag
ctcccaaggaacgtggtccacctggtgtcggccgggggccagcaccacctcatcagccag
ccggcccaggtggctctcattcaggccatggcccagccaggtgggcaggctatgcctggg
cacccacccactgccatcctgcctgccccagcccctgcccctcctgccacctctgctgct
ctcagtgtccccattgccgccactcaagtgccctcctccatggtgaacagctctggcgtg
gtgaagattgtggtgcgccaggccccccgagatggcctggcccctgccctgcagcccccg
accccgccgccgccacgcccacctcccacagccactgctgctgccacacccctgcctggc
ctgcctgctgctctggtggccccgcgagctccgctgcctgtggcacccgttccgccctcc
cgcctgcctgccccacccctggtacccatgcggggccccgcccctctccaggctctggtg
cgacctgtcatgcgggtggtgcccgcccctgcaatagacctgccagctccgatgccagtc
cccacaatgtcccctgctccagtggggcctctgccggctgcaccaacccccctgtcagcc
ccccgccccctgctcccagcatcgcccagccctgtacccaaggaggagcccgagatgctg
acgctgcgctccagccctcccacaccgccgcctccgtctgctccagtctcccggccccgt
cgccaacccccgcctccgcctcgctcaccattctacctggagtcactggaagagaagcgc
aagcggcagaaggaggagcgcctggcccggctcttccgcctcaacgagcagcactgtgcc
ctggcacctgtgtatggcactgaggtgcttcgcctctgtagtctcttccccccgacaacc
cacgatcccgaggctgaggcagagcccaaggcccctggaggtgggtggcggggggccggc
tatgcccactgctacatggcccaaatgcagcgggacccacagcgcctggcggagtactgg
cagcaggcgcccgccctcagccgcgccatcctcacaccccagcagaggatcgagcaactt
gaggacatcatcgaacggttcatcttcgtgctgccacctgtggaggttccaccggtggcc
ctgcacacatcacacccaccccccacactgcgcctacggcaccaggccctggcggctgcc
ctgcgccgagagctgtcaccgcgagcccgggccttgcaccgtgtcgtctgcaacatgcgc
acccagttccctgacctgcgcctcatccagtacgactgtgggaagcttcagacgttggac
ctgctgctgcggcagctgaaggcggaggcacaccgtgtgctcatcttcacgcagatgacg
cgcatgctggacgtgctggagcagtttctcaactaccacggccacatctacctgcgcctg
gatggcagcacccgtgtggagcagagacaggcgctgatggaacggttcaatgcagacaag
cgcatcttctgcttcatcctgtcgacacgcagcgggggggtgggcgtgaacttgacaggc
gccgacactgtggtcttctacgacagcgactggaaccccaccatggacgcccaggcccaa
gaccgctgccaccgcattggccagactcgtgacgtccacatctacaggtgccctgggacc
cttccagcccccactccccgtcaagggagcccaggcatccaggctcccgggcctcctgct
cgtaacccccagtctcccagcacttag
DBGET
integrated database retrieval system
