Alligator mississippiensis (American alligator): 102561522
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Entry
102561522 CDS
T03087
Symbol
HERC3
Name
(RefSeq) HECT and RLD domain containing E3 ubiquitin protein ligase 3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102561522 (HERC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amj04121
]
102561522 (HERC3)
Enzymes [BR:
amj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
102561522 (HERC3)
Ubiquitin system [BR:
amj04121
]
Ubiquitin ligases (E3)
HECT type E3
102561522 (HERC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
102561522
NCBI-ProteinID:
XP_019343653
LinkDB
All DBs
Position
Un
AA seq
1067 aa
AA seq
DB search
MCLDFLPVPSIGKGSIKLHDLLKEEKMLCWGYWSFGQPGIGSNLQVIIPEPQVYGFIHDR
NVKEVACGGNHSVFLLEDGEVYTCGMNTKGQLGHEREGNKPEQIGALADQHIVHIACGES
HSVALSDQGQLFAWGAGSDGQLGLTTIEDSVAVPRLIKKLNQQTILQVSCGSWHCLALSA
DGQFFTWGQNNYGQLGLGKECPSQATPQRVRFLDGIPLAQVAAGGAHSFALSLSGAVFGW
GKNSSGQLGLSDEQDRETPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQL
GHDSMNDEVNPRSVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGIGHTCN
VKCPSPVKGHWAAHNGQLSGKPDACKYHIVKHIFSGGDQTFVLCSKYENSLPADDFRTIN
ESHYTCLINDETIDVWRQNLLEKNSYISVNNVVQILSSAACWNGSFLEKKIDEHFKTSPK
IPGIDLNSTRVLFEKLMNSQHSILLDQILKSFESFLIPQLSSSPPDVEAMRIYLILPEFP
PFQDSKYYITLTLPLAMAILRLDTNPSKVLDNWWSQVCPRYFLRLVDLYKGAVVYLLSGR
KTLLIPVLFSSYITAALRLLEKLHKVNQKVRHVEYDKFYIPEISSLVDIQEDYLMWFLHQ
AGMKVRPSIMQDAVTLCSYPFIFDAQAKTKMLQTDAELQMQVAINGANLQNVFMLLTLEP
LLARSPFLVLHVRRSNLVGDALRELSIHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLL
LKELLNPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLHFPLALYKKLLNVTPC
LEDLKELSPTEGRSLQQLLDYPGEDVEEMFCLNFTICRESYGVTEQKKLIPEGDKITVQK
ANRQEFVDAYVNYIFSLSVHEWYTAFSTGFLKVCGGKVLELFQPTELRAMIVGNSNYNWE
ELEESTIYKGDYSATHPTVKMFWETFHEFPLEKKKKFLLFLTGSDRIPIYGMSSLRMIIQ
STSSGEQYLPVAHTCYNLLDLPKYSSKEILSTRLTKAIDHYEGFSLA
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgtgcctcgacttcttacctgtcccatctattggtaaaggcagcataaagctacatgac
ttgctgaaagaagagaaaatgttatgctggggctattggtcttttggccagcctgggata
ggtagcaatctgcaagtaatcattcctgagccccaggtatatggatttattcatgacaga
aatgtcaaggaggtggcttgtggaggaaaccattctgtcttcctgctggaggatggagaa
gtctatacctgtgggatgaataccaaaggacaactgggccatgaacgagaaggaaacaaa
ccagagcaaattggagcattggcagatcagcacatagtgcacattgcctgcggagagtct
cacagcgtggcactcagtgaccagggccagctctttgcatggggtgctgggagcgatgga
cagctggggcttactaccattgaagattcagtggcagttccaaggttaataaagaaattg
aaccagcagacgatactgcaggtctcctgtggcagttggcattgccttgctctctctgct
gatggccagttcttcacctgggggcagaacaactacggccagctgggcctggggaaagaa
tgcccctcacaagccacgccacagcgtgtcagatttcttgatgggattcccttggcacag
gttgctgctggtggggctcacagctttgccctgtctctctcaggagctgtgtttggttgg
ggaaagaacagctcagggcagctgggcttaagtgatgaacaagatcgagagaccccttgc
catgtgaaactcttacggactcaaaaagttgtctatatcagctgtggagaagaacatact
gcagttctaacaaagaatggaggggtgttcacgttcggtgcaggttcctgcgggcagctt
ggccatgattccatgaatgatgaggttaatccccgaagcgtgctggaactgatgggtagt
gaagtgtcccagattgcttgtggcagacaccacactctcgcctttgtgccttcttctgga
atgatctatgcattcggctgtggaacaagaggtcagctgggaattggacacacttgcaat
gttaaatgcccatctccggtcaaaggtcattgggcagctcacaatgggcagctctcaggg
aagcctgatgcctgtaaatatcacattgttaaacatatcttctctggaggagaccagaca
tttgtactttgctccaagtatgagaattctttgccagctgatgatttccggaccataaat
gaaagccattatacctgtttaataaatgatgaaactatagatgtttggagacaaaacctt
ttagaaaaaaacagctatatttctgtcaataatgttgtgcagatcctgtcctctgctgca
tgctggaatggaagcttcctggagaagaaaattgatgagcactttaagaccagtcctaaa
atcccagggatagacctgaattccacgcgagtgctgtttgagaagctaatgaactctcag
cattccattctactagaccagatcttgaagagctttgaaagctttttgattcctcagctg
tcaagctcaccaccagatgtcgaggcaatgagaatctatttgattctacctgaattccca
ccatttcaagactcaaagtattatataacattaactcttcctctagcaatggccattctg
cgtctggatacaaacccaagcaaagttttagataattggtggtctcaggtgtgcccaaga
tatttcttaaggttagtggacctctataaaggtgcagttgtttacctcctcagtgggcga
aagacgttactgatccctgtccttttcagtagctacattacagctgctctcagactgctg
gagaagctgcacaaggtaaatcagaaagtcagacatgtggaatatgacaagttttatatc
ccagagatttccagcttggtggacattcaagaagactatctcatgtggttcttgcatcaa
gcaggaatgaaagtaaggccatctatcatgcaggatgctgtgacactctgttcttaccct
ttcatctttgatgctcaagccaagaccaaaatgctacagacagatgcagaactacaaatg
caggtggcaatcaatggtgcaaacttgcaaaatgtcttcatgcttctcactctggagcct
ctgctggccagaagccctttcttagttcttcatgtccgcaggagcaacttggttggcgat
gctttgagggagctgagcattcattcagatattgatttgaaaaagcctcttaaagtgatc
tttgatggcgaggaggctgttgatgctggaggggttacaaaggaatttttccttttgctg
ttaaaagagctcctgaatcccattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnntcgacctccattttccgttggctctatacaagaagctgttgaacgtgacaccttgc
ttagaagatttaaaagagttgtcccctacagaaggaaggagtcttcagcaacttttagat
taccctggagaagatgtagaagaaatgttctgcttgaattttacaatatgcagggaaagc
tatggcgtgacagagcaaaagaaattaatacctgaaggagacaaaattacggtgcagaag
gctaatcggcaagaatttgttgatgcctacgtgaattatatcttcagtctctcagtccat
gaatggtatacagccttctctactggctttctgaaagtgtgtggtgggaaagtgcttgaa
ctctttcagcccacagagctgagggccatgatagttgggaacagcaactacaactgggag
gaactggaagagagcactatctacaaaggggattactctgctacacacccaacagtgaag
atgttctgggaaacctttcatgaatttcccttggaaaagaagaagaaatttctattgttc
ctgaccggcagtgaccgcattcctatctacggcatgtcaagcttgcgcatgatcatccag
tccacatcaagtggggagcagtacctgcccgtggctcacacctgctataacctccttgat
ctacctaagtacagcagtaaggagatcctgagcacacggctcacaaaagccattgatcac
tatgaggggtttagcttggcctga
DBGET
integrated database retrieval system
