Alligator mississippiensis (American alligator): 102561640
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Entry
102561640 CDS
T03087
Symbol
HGS
Name
(RefSeq) hepatocyte growth factor-regulated tyrosine kinase substrate
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03250
Viral life cycle - HIV-1
amj04144
Endocytosis
amj04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102561640 (HGS)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102561640 (HGS)
04145 Phagocytosis
102561640 (HGS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102561640 (HGS)
Membrane trafficking [BR:
amj04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
102561640 (HGS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hrs_helical
VHS
FYVE
FYVE_2
ELMO_ARM
UIM
FYVE_CARP1-2
Motif
Other DBs
NCBI-GeneID:
102561640
NCBI-ProteinID:
XP_019351813
LinkDB
All DBs
Position
Un
AA seq
712 aa
AA seq
DB search
MIRQGDTQAKYAVSAIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELK
EILKVEASVRNKILYLIQAWAHAFRNEPKYKVVQDTYQIMKVEGHVFPEFKESDAMFAAE
RAPDWVDAEECHRCRVQFGVMTRKHHCRACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPC
YEHLNKKAEGKAAATSDLPPEYLTSPLSQQSQLPPKRDETALQEEEELQLAIALSQSEAE
EKERMRQKTTYSMYPKAEPTPITSSAPPVSTLYSSPVNSSAPLAEDIDPELARYLNRNYW
EKKQEEARKSPTPSAPLSLTELSSQPGEVHTAPLSLVEQQYQNGESEENHEQFLKALQNA
VTTFVNRMKSNHMRGRSITNDSAVLSLFQSINNMHPQLLELLNQLDERRLYYEGLQDKLA
QIRDARGALNALREEHREKLRRAAEEAERQRQIQLAQKLEIMRQKKQEYLEMQRQLAIQR
LQEQEKERQMRLEQQKQTIQMRAQMPAFSLPYAQLQAMPPAGGVIYQPSGPTSFPGTFSP
AGSVEGSPMHSVYMNQGGTGPYTAMPVAGTDPGMVSAYMYQAGAGGGQATQQGQAVPTTT
PAYSSYQPTPTQGYQNAVSQAPQSGTMGYMGSQSVSMGYQPYGMQGLMSTLPGQDGQLSS
LPPQQPYLPGQQPLYQQMAPAGAPPPQPPPQAPAQVQAAAQGGGEAQLISFD
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgattcgtcagggcgacacgcaggctaagtacgcagtcagtgccatcaagaagaaggtc
aacgacaagaatccacacgtggccctgtatgcgctggaggtcatggagtctgtggttaag
aactgtggccagacagtccacgatgaggtggccaataaacagaccatggaggaactgaag
gaaattctcaaggtggaagcaagtgtccgcaacaagatcctgtacctgattcaggcctgg
gctcacgccttccgcaacgagccaaagtacaaggtggtgcaggacacctaccagatcatg
aaggtggaaggtcacgtctttccggaattcaaggagagcgacgccatgttcgcagcagag
cgggctcctgactgggtggatgctgaggagtgtcaccgatgccgagtgcagtttggggtc
atgacacggaagcatcactgccgggcgtgcgggcagattttctgtgggaagtgctcctcc
aagtactccaccatccccaagtttggcatcgagaaggaggtgcgggtgtgcgagccctgc
tacgagcacctcaacaagaaagccgagggcaaagctgctgccacctctgacctgccccct
gagtacctgaccagccccctttcgcagcagtcccagctgcccccaaagcgtgatgagaca
gccttgcaggaggaggaggagctccagctggccattgccctctcccagtcggaggctgag
gaaaaggaaaggatgaggcagaaaaccacctactccatgtacccgaaggcggagcccacg
ccgatcacctcgtcagcccccccagtcagcaccctctactcctcccctgtgaactcctct
gctccgttggctgaggacattgaccccgagctggctcggtacctaaaccgcaactactgg
gagaaaaagcaggaggaggcccgcaagagccccaccccatctgcgccgctgtccctcacg
gagctgagcagccagcctggagaagtccacactgccccactcagcctggtggagcagcag
taccagaacggggagtcagaggagaaccatgagcagttcctgaaggcgctgcagaacgcc
gtcactacctttgtcaaccgcatgaaaagcaaccacatgcgaggccgcagcatcaccaat
gactcggctgtgctctccctcttccagtccatcaacaacatgcacccacagcttctggag
ctgctcaaccagctggatgagcgcaggctgtactacgagggcctgcaggacaagctggcg
cagatccgggatgcccgtggggccctgaacgcgctgcgtgaggagcaccgcgagaagctg
cgccgggcggctgaggaggcagagcgccagcgccagatccagctggcccagaagctggag
atcatgagacagaagaagcaggagtacctggagatgcagcggcagctggccatccagcgg
ctgcaggagcaggagaaggagcggcagatgcgcctggagcagcagaagcagacgatccag
atgcgggcccagatgccagccttctccctgccctatgcccagctccaggctatgccgcct
gcgggaggggtgatctaccagccctctggccccaccagcttccctggcaccttcagccca
gcaggctccgtggagggctcccccatgcacagtgtgtacatgaaccaggggggcaccggg
ccctacactgcgatgcctgtcgcagggacagatcctggcatggtgagtgcctacatgtac
caggccggtgctggaggcgggcaggccacgcagcagggacaggcagtgcccaccacaacc
cccgcctactcctcctaccagcccactcccacgcagggctaccagaacgcggtctcgcag
gccccgcagtcgggcaccatgggctacatgggcagccagtcagtgtccatgggctaccag
ccctacggcatgcagggcctcatgtcgacccttcccggccaggacgggcagctgagcagc
ctgcccccgcagcagccctacctgcccgggcagcagcccctgtaccagcagatggccccg
gccggagcgccgcccccgcagccgcccccgcaggccccggcccaggtgcaggcggcggcg
cagggcgggggcgaggcccagctcatctccttcgactga
DBGET
integrated database retrieval system
