Alligator mississippiensis (American alligator): 102561648
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Entry
102561648 CDS
T03087
Symbol
TDRD6
Name
(RefSeq) tudor domain containing 6
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amj03036
]
102561648 (TDRD6)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Gene silencing
piRNA pathway
102561648 (TDRD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DUF4537
Tudor_2
Motif
Other DBs
NCBI-GeneID:
102561648
NCBI-ProteinID:
XP_014463891
LinkDB
All DBs
Position
Un
AA seq
2293 aa
AA seq
DB search
MCSLLGIPSPGSAVSLRVSFVDVHPDVPLARLWGLAGERRDEYAALXSXXXXELGGRWQR
CRVVSRQARGAPAYRVFLLDEGRSVCAAAHHLARGRPELFQLPSEVLGCVLADLVPPGGG
EPAGAVWPLGTAEFLSCLQGKEVSGQVREVLLPQRLVVLELPWLLAQMQHLGLAQQAAPS
DFRALLQRCLAPVSALVPQPPLLPPAAAAPADYFYPRLQPGVTEPVLVTQVSDPQRIYCQ
LRSLSQEIRRLSDTMRQLYEVAVGRGQEQEVPPKPGSPCAARGIDGHWYRALLLETFGGE
LGRPLAQVMCVDYGRKEFVTGANLRRLPPECFRMPVLTYPCALQGVSDGGCGWSRSQLSE
LKALLLGKAVSARIDAYSSFEHLYYVSLYGDNGINLNCLYGVQAHCLSASLLQSGSELPD
AAAEEPEQPPGAPPASAAVQRAPARSARLPVIRLKAGVFCKGQVSFARDPGEFWLRLQEH
KQPLGQLMRSMSDFYSRAQKLEAVLLEPQLGSLCCAKWKEKAYYRALVTRVLGKGVEVHL
VDRGNTETLDWYEVKELLPQFMELPAVALKCCLADASPLGESWSKECMSYFKRAVRNKEL
TFHVLGTQGDKYVVEILDQSQTGEKNVCKIMTWGGYAKFQGAEVPQVHKKAPAERLGQDP
KWGAEEGKQASATDSVTTSRRIEIEPKPKIHHTVLKSSAALVKDQPTVSADDLSDSVSDK
EKMPPNLPCSFAQNYLEIKPGLPPYEDQLEVGSTVDVVVSCVESPGYFWCQLRRNSQELK
KLMATIQDYCKGSAQPHYLPNPVCLAKYSEDKKWYRALILSGILPKEEVEVIYVDYGNKD
VVSLKNLCSINADFLKLKAQAFRCSLYNLIQPTGPDPLVWDEEAISAFQEFVDASMECLQ
LNCTIFALAAVNNKELFNIVDLITPFESVCHFLIERGLAKPVQPQSPLASSVQLYSYYYS
THDIKIGSEEEIYVTHVDDPWKFYIQLQRSADALEQLTDNIDQLNKVLLCLKMSQGSGNL
CLARYTDSHWYRGIVTKTKPNKEVYFVDFGNTEVVKKEDILPIPNDAYNILLLPMQAIKC
SLSDICNVSEEATEWFTKAVLDKHLKAIIVAKESDGKLMIELYDGNIQINAKMKQDFSLP
NRATHRHPENETLHSKNQDAKEERNENVKSFTTSTSKFTERENWRSEMQRGESSCKTSFI
CKEAKLLPSPKKESLFDPWKGSVERFNHNKASPLDKVEESPLPIRKEDKGSVAVVSGTAG
NRDQGENSVYVPLKNLSDLHQKNIMPGLKTLVYISHVNNLSDFYIQLASDESQLNSISET
LNNRTRRENLCKQQLKTGDLIGAAYSEDGLWYRAVIKEKSSEELISVQYIDYGNTSVVNI
SETCRVPEDTTLIPVMSIHCLLGGLQAVSCLDWTQKAVLYFSERTSDVQINCEFVEKVKD
KWEILLSDDQGMIAVDLIEKFAAREGSQLSEMRDGDESRCDVPNNVPDLSSDEQNKISHL
NDTETFSWKIPEVGQTVEAYVTMVKGPGFFWCQIAGTESINYLEEKLKIAGELSVNSTDD
FRSSVKSGAICIVKSSENEKFYRAEIRSIKGTSLIVRHVDYGTEEVVDREVVRQVPDELL
TIPNQAFPCCLSGFDSSEGSWISEITDKLHDMIAESLLGITIIEIKKDNPSGIPLCSVKM
QCNGVSINEELSCFWKPNLGNRDKTSANIENTSEGKNESTGIGDKDFFVLEEAASAAWTQ
VVQNENQSAILDPELFHPTKSDCLHAPETPFPLEEVELVLPTSNGEHQVKHQISFETFGT
DSALLESESNSKIFLEPEIADVQVLFSSETKDLKHELSKMEVLDNISQTEMLELTVDCQS
LSDTSEELLKLQSQYVQPSLGEEIKNLMELDHLQTSSSYDEIRDLLLELSWLEMQSSLDE
RTKEMLELEFLDEQLLGDETRDLVTQKSLEVSPSLEERENLLELKSLEMQPSFGDDREET
LEPLPSNVQFSLVDEMERLKLDLDMLQVHQMRSLAEEVLEMKSPQIPLLLDEAGKELEVG
THQAEIVLHGTIKEPVELVPSEVLASLGDEAKDDVLELEESVLQLPANSIVQLSALKTDI
KQGAVYSVELGNVGLLDTKHECAEQLSVQETSSAEEQMKQGCHKAFKEYGDPYASGEPLD
EETEIEKQDDSFADHGAEQRACGACNLEGFAVGSKCVVWTSPKWCEAQILEVTDEGTRVL
NLSNGNEEIVNPENVWNGIPELARSSSEEPTDAADNLHPLSLEVSVFQEKGTCYDSDVTN
PCTAANIPEKASE
NT seq
6882 nt
NT seq
+upstream
nt +downstream
nt
atgtgctcgttgctgggaatccccagcccgggctcggccgtgagcctgcgcgtgtccttc
gtagacgtgcacccggacgtgccgctggcgcggctgtgggggctggcgggcgagcggcgc
gacgagtacgcggcgctgnncagcnnnnnnnnnntggagctcggcgggcgctggcagcgc
tgccgcgtcgtgagccgccaggcccggggcgcgcccgcctaccgcgtcttcctgctggac
gagggccgctccgtgtgcgccgccgcccaccacctggcgcggggccgacccgagctcttc
cagctgccctccgaggtgctgggctgcgtgctggccgacctggtgcccccgggcggcggg
gagccggcgggcgctgtctggccgctgggcactgccgaattcctgtcctgcctgcagggc
aaggaggtgtcggggcaggtgcgcgaggtgctgctgccgcagcgcctggtggtgctggag
ctgccctggctgctggcgcagatgcagcacctgggcctagcgcagcaggcggcgcccagt
gacttccgcgccctgctgcagcgctgcctggcgcccgtctcggccctcgtgccccagccg
cccctgctgcctcccgccgccgctgcccctgccgattacttctacccacgcctgcagccg
ggggtgacggagccggtgctggtgacgcaggtgtcggacccacagcgcatctactgccag
ctgcgcagcctgtcacaggagatccggcgcctctcggacaccatgcgccagttgtacgag
gtggcggtcgggcgggggcaggagcaggaggtgccgcccaagccgggctcgccttgcgcc
gcccggggcatcgacgggcactggtaccgcgcgctgctgctggagacgttcgggggcgag
ctaggccggccgctggcccaggtgatgtgcgtggactacggcaggaaggagttcgtgacg
ggcgccaacctgcgccgcctgccccccgagtgcttccgcatgcccgtgctgacctacccg
tgcgcgctgcagggcgtctcggacggtggctgcggctggtcccgctcgcagctgagcgag
ctgaaggcgctgctgctgggcaaggcggtgagcgcccgcatcgatgcctacagctccttc
gagcacctctactacgtgagcctgtacggtgacaacggcatcaacctcaactgtctttac
ggcgtgcaggcacactgcttgtctgccagcctgctgcagagcggctcagagctgcccgat
gctgccgccgaggagccagagcagccacctggggcgcccccggcttcggcagcagtgcag
agggctccggcccgttccgcccgcctgcccgtcatacgactgaaggcgggagtgttctgc
aaagggcaggtgtcctttgcccgggacccgggcgagttctggctgcggctccaagagcac
aagcagcccctcggccagttgatgcggagcatgagcgacttctactcccgagcccagaag
ctggaggccgtgctcctggagccacagctgggctccctttgctgcgccaagtggaaggag
aaagcctactatcgtgcccttgtcaccagggtgctgggcaaaggcgtggaagtgcatctg
gtggaccgaggcaacaccgagaccttggactggtatgaggtaaaagagctgctccctcag
ttcatggagctgcctgctgtggctctgaagtgctgcttggcagatgcatcccctttgggg
gagagttggagcaaggagtgcatgtcctacttcaaaagggctgtgcggaacaaggagctg
acattccacgtgttgggtacacagggtgacaagtatgtggttgaaattcttgaccagtcc
caaacaggagagaaaaatgtatgcaaaatcatgacctggggaggatatgccaaattccag
ggggctgaggttccgcaggtacataagaaggcacctgctgagcgtctggggcaggatccc
aaatggggtgctgaggaggggaagcaagccagtgctacagatagtgtcacaaccagtagg
agaatagaaatagagcccaaaccaaaaatacatcacacagtgctcaaatcatctgcagct
ttggtaaaagaccagcccactgtatcagctgatgatttaagtgactcagtttctgataag
gaaaaaatgcccccaaatctgccctgctcttttgctcaaaactacttggaaatcaaacca
ggacttcctccttatgaagatcagctggaagtaggaagcacagttgatgtggtagtgtcc
tgtgttgaaagtcctggctacttttggtgtcaactacggagaaattcccaagagcttaag
aaactaatggctacaattcaggactattgcaagggttcagcacagccacattatttgcca
aatcctgtatgtttagccaagtattcggaggataagaagtggtacagagctttgattctt
agtggaatacttcccaaagaagaggtagaggtgatatatgtagactatgggaataaggat
gtggtttctcttaagaatttgtgttcaatcaatgcagatttccttaaactgaaggcccag
gctttcagatgtagtctttacaacttaattcagccaactggtcctgatcctcttgtttgg
gatgaagaggcaatttcagcttttcaggaatttgttgatgcctccatggagtgtttgcaa
ctgaactgtacaatatttgctctggctgcggtgaacaacaaagagctatttaatattgtg
gatttaattacaccttttgaaagtgtctgccattttctgatagagagaggtttagccaaa
ccggtacaacctcaaagtcctctggcatcctctgttcagctttattcttattattattct
acgcatgacatcaaaattggcagtgaggaagagatttatgtaacacatgtagatgatcca
tggaagttctacatccaacttcaaagaagtgcagatgctctagagcagctcacagataac
attgatcaactgaacaaagtactgctctgtttaaaaatgtctcaaggctctggaaacttg
tgtcttgcaaggtatactgacagtcactggtacagaggaatagttacaaaaacaaagcct
aacaaggaagtatattttgtggattttggaaacacagaggtggtaaagaaagaagatatt
cttcctatacctaatgatgcttataatatcttgcttttgccaatgcaagccataaaatgt
tcattgtctgatatctgtaatgtatcagaagaagctactgaatggtttacaaaagctgtc
ttagataagcatttaaaagcaataattgtagcaaaagaatctgatggaaaactgatgatt
gaactctatgatggtaatattcaaattaatgcaaaaatgaaacaggattttagcttacca
aatagagcgactcacaggcacccagaaaatgaaactttacactctaaaaatcaagacgct
aaagaagagagaaatgaaaatgtgaagtcatttacaacatccacaagtaagtttactgag
agagagaattggagatctgaaatgcagagaggagagagcagttgtaaaaccagttttatt
tgtaaggaagcaaaactgctcccatctcctaaaaaagaatcgttatttgatccgtggaaa
ggatctgtggaaaggtttaaccataacaaagcctctccccttgataaagtagaagagtcc
cctcttcccattaggaaggaagataaggggtctgttgctgttgtatctggtactgctgga
aatagagatcagggagaaaatagtgtatatgttcctttaaaaaatctgtctgatctgcat
caaaagaacataatgcctggacttaaaactttagtatatatttctcatgtcaataacctt
tcagatttttatattcagctagcaagtgatgaatctcaacttaatagcatctcggagaca
ttaaacaacagaacaagaagagagaatctctgtaaacagcagttgaaaacaggagactta
attggtgctgcttattcagaagatggtttatggtatagggctgtaattaaagagaaatct
tctgaagagctgattagtgttcagtatatagattatggcaatacttcagtagttaacatc
agtgaaacttgtagagtcccggaagacactacattaattccagtgatgagcatccattgc
ctccttggtggacttcaagctgtaagttgtctagattggacacagaaagcagtgctctac
ttctctgaaagaacaagcgatgttcagataaactgtgaatttgtagagaaggtcaaagac
aaatgggaaattcttctcagtgatgaccaaggcatgatagcagtggatttgattgaaaaa
tttgcagcaagagaaggctctcaattatcagaaatgcgtgacggagatgagagtaggtgt
gatgttcctaacaacgtgccagacctgtcttctgatgagcaaaacaaaatttctcatcta
aatgacactgaaacattctcctggaagattcctgaggtaggtcagactgtagaagcgtat
gtcactatggtaaagggtccaggatttttttggtgtcagattgctggcacagaaagtata
aactacctggaagaaaaactgaagattgctggagaactttccgtaaatagcacggatgac
tttagatctagtgttaaaagtggtgccatttgtatagtgaaaagtagtgaaaatgaaaaa
ttttacagagcagaaattagaagcataaaaggtaccagcctaattgtcagacatgtggat
tatggaactgaggaggtcgttgatagagaggtggtcagacaagttcctgatgaactgctc
acaatacctaatcaagcatttccatgctgtctgtctggatttgattcttcagagggctcc
tggattagtgaaataacagataagcttcatgacatgattgcagaatctttactagggatc
acaataatagaaataaaaaaggataatccatctggaattcctttgtgtagtgttaaaatg
cagtgcaatggagtaagcattaatgaagaactgagttgtttttggaagccaaacctagga
aaccgtgacaagacttcagcaaacattgagaatacgtctgagggaaagaatgagagcaca
gggataggtgataaagacttttttgttcttgaagaggcagcctctgcagcttggactcaa
gtagttcagaacgaaaatcagagtgccatccttgatccagaactattccatccaacaaag
agtgactgtctacatgctccagaaacaccatttccactggaggaagtggaattggtttta
cccacatctaatggagaacatcaagtgaagcatcaaatcagttttgaaacttttggtaca
gacagcgctttacttgagagtgagagcaatagtaaaatatttttagaaccagaaatagct
gatgtgcaggtgcttttcagtagtgagacaaaggacttaaaacatgaactatctaaaatg
gaagtgttggataatatatcccaaacagagatgttagaattgacagttgattgtcagtct
ttgagtgatacaagtgaagagctactaaaattacagtcacaatatgtgcaaccttccctg
ggtgaggaaataaagaatctaatggaactggaccatttacaaacatcatcttcgtatgat
gaaataagagaccttctactggaactaagctggcttgaaatgcagtcttctctggatgag
agaacaaaggagatgttggaattggaatttcttgatgagcagcttttgggtgatgaaaca
agggatttggtgactcagaaatcacttgaagtttctccttcacttgaagaaagagagaac
ttgctggagttgaagtcacttgaaatgcagccttcatttggtgatgatagagaggagaca
ttggaaccactaccatccaatgtacaattttctttggttgatgaaatggagagattgaaa
ttggatttggatatgcttcaagttcatcaaatgagatctttagctgaggaagtactggaa
atgaagtctccccagatacctttattattggatgaagctgggaaagaattggaagtaggg
acacatcaggcagagattgtacttcatggcacaataaaggagccagtggaactggtgcca
tctgaagtgctggcttctctgggtgatgaagcaaaagatgatgtgctggagttagaagaa
tctgtattacaacttcctgcaaatagtatagttcagctttctgctctcaaaacggacata
aagcaaggagctgtttacagtgtggagttaggtaatgtagggctgcttgacactaaacat
gaatgtgcagaacagctaagtgtgcaagagacgagttctgcagaagaacagatgaaacaa
ggttgccataaagcatttaaagaatatggagatccatacgcaagtggggagcctttagat
gaagaaactgaaatagaaaagcaagatgactcttttgctgatcacggtgcagaacaacgt
gcctgtggagcctgcaatctagaggggtttgctgttggttccaaatgtgtggtgtggaca
tccccaaagtggtgtgaggctcagattttggaggtaacggatgaaggtaccagggttttg
aatctttcaaatggtaatgaggagatagtaaatccggagaacgtttggaatggtattcct
gagcttgcaaggagttcatctgaggaaccaactgatgcagctgataacttgcatcccttg
tcactagaggtctcagtgtttcaagaaaaaggaacttgttatgattcagatgtaaccaat
ccttgtacagcagccaacatccctgaaaaggcatctgagtga
DBGET
integrated database retrieval system
