Alligator mississippiensis (American alligator): 102561649
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Entry
102561649 CDS
T03087
Symbol
ZCCHC7
Name
(RefSeq) zinc finger CCHC-type containing 7
KO
K12597
protein AIR1/2
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102561649 (ZCCHC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102561649 (ZCCHC7)
03016 Transfer RNA biogenesis [BR:
amj03016
]
102561649 (ZCCHC7)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
102561649 (ZCCHC7)
Transfer RNA biogenesis [BR:
amj03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
102561649 (ZCCHC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
AIR2-like_ZnK4
zf-CCHC_2
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
102561649
NCBI-ProteinID:
XP_006272141
LinkDB
All DBs
Position
Un
AA seq
576 aa
AA seq
DB search
MFDGYEDLDAYEDDLYREESSSELSVDSEVEFHLYSQVHYAQNLGEINGQEENKQVGSIK
KEGQSSVLTNKLVWEKNIIELSDSDFIQISDGPEVIILSDTADEDSIYKSKVKKTATSLL
PNKISNCPGNSTRNRARASKHNSMASNRLMGETSCKEKMAHVKSNSISIGASMIQEILVI
EDSSNGEEEKESTVSESDNLESWMLLEYDKDDKDEDIILNVEGCGTSVSEGESGVNWSIS
DKDLEAQICNYPSLRRNNRYYATDKNVTCRNCNKQGHLSKNCPTPKKMPPCCLCSERGHL
QNTCPARFCLNCCLPGHYSKECLERAYWSKRCNRCDMKGHYADACPEIWRQYHLTTKPGP
IKKASSSEYSIIAYCYNCSRKGHYGYECSERRMYGGVFPSSPFIYYYDNKYDIKSRAKRL
KRKIEELQEVGLLPVEFKRPCMEEEHMRHCHKKKKKLWKEHDKPSKREKHHKKPKKKSQA
EKHKDKKQRKGIQNNQDGEEDFPRGCKAHVPKASKKYRRSVFQPHSDKMRNTQELVEAVK
KKKKNQQNERDWSPTTHESLFLIKQRKKKSKQKSRC
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgggtatgaagacctagatgcctatgaagatgacctttatcgtgaagagtca
tctagcgaactgagcgtggacagcgaagtagaatttcatctctatagccaggtccattat
gctcagaatcttggggaaatcaatggacaggaagagaataagcaagtgggctccatcaag
aaagaaggtcaaagttcagtgttgaccaataaactggtttgggaaaagaatattattgaa
ctgtcagacagtgatttcattcagatttcagatggtcctgaggtcatcatcttgtctgac
acagccgatgaagacagcatttacaaaagtaaagtgaagaagacagcaacctcattgtta
ccaaataaaatatctaattgtccaggaaactccacaaggaatcgtgccagggcttctaaa
cataattccatggcttctaacaggttgatgggagaaacttcatgcaaagagaaaatggcg
catgtgaaatctaattcaatttctattggggcttccatgatccaagaaattctggtaata
gaagatagctcaaatggggaggaagagaaggaaagcacagtttctgaaagtgataacttg
gagagctggatgcttttggaatatgataaagatgacaaagatgaagatatcattttgaac
gttgaaggctgtggaacttctgtcagcgaaggagaaagtggagtgaactggtccatcagt
gacaaagatttggaggcacagatctgtaactatccgtctctgaggcgtaacaacagatac
tacgcgacagacaaaaatgttacttgtagaaattgcaataaacagggccatttgtccaaa
aactgccctactccaaagaaaatgcctccttgttgcctctgctcagagagaggtcactta
caaaacacctgcccagcacggttttgtttaaattgctgtttgcctggacactactctaag
gaatgccttgagagggcttattggagtaagcgttgtaatcgctgtgatatgaaaggccat
tacgctgatgcttgcccagaaatatggaggcagtatcacctaacaaccaaaccaggacca
atcaagaaggccagttcttctgagtattcaatcatagcatattgctacaattgttcccgg
aaaggacattacggatacgaatgctcagagagacggatgtacggtggagtattcccctcg
tctccattcatctactactacgacaataagtatgacatcaaaagcagagctaagaggcta
aagagaaagattgaagaactgcaggaagtaggccttctgccagtggaattcaagagacca
tgcatggaggaagagcacatgaggcattgccataagaaaaagaaaaagctttggaaagag
catgacaagcctagtaaaagagaaaaacatcacaaaaaacccaagaaaaagtcccaggca
gaaaaacacaaagacaagaagcagaggaaaggtatccaaaataatcaagatggagaggag
gactttcctagaggatgcaaagcgcatgtgcctaaagctagcaaaaagtatcgtcgctct
gtcttccagccacatagtgacaaaatgagaaacacccaggaacttgtagaggcagttaaa
aagaagaaaaaaaaccagcaaaatgagagagactggagccccaccactcatgagagctta
ttccttataaaacaaaggaaaaaaaaatccaaacagaaatccagatgctaa
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