Alligator mississippiensis (American alligator): 102561771
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Entry
102561771 CDS
T03087
Symbol
TRUB1
Name
(RefSeq) TruB pseudouridine synthase family member 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amj03016
]
102561771 (TRUB1)
Enzymes [BR:
amj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
102561771 (TRUB1)
Transfer RNA biogenesis [BR:
amj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
102561771 (TRUB1)
Prokaryotic type
102561771 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
DMA
Motif
Other DBs
NCBI-GeneID:
102561771
NCBI-ProteinID:
XP_006264800
UniProt:
A0A151NUW2
LinkDB
All DBs
Position
Un
AA seq
290 aa
AA seq
DB search
MASKVCEELGTLMAGMAADKLFSLSGLFAVYKPKGPTSADLLNQLKAKLLAEAGVQEVVR
KRKKPILKIGHGGTLDSAASGVLVVGIGKGTKLLGGLLAGSKKYTVIGELGKATDTLDAT
GKVTEEKPYDQITKGDLEKVLQKFTGDIMQVPPLWSALKKDGQRLSFLMKKGVAVEAKPA
RPVRVYNLSLQNFQPPLFTLDVECGGGFYVRSLVSDIGKELSSCASVRELTRTKHGPFTL
EEHTLHEDKWTIDEIARSLEHCMSLLPEEPSHKKLKTEHSEESAVSCEDK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaaggtgtgcgaggagctggggaccttgatggccggcatggcagcagacaag
ctcttctcgctgagcgggctctttgctgtgtataagcccaaggggcctacctcagctgat
ctgctcaaccagctgaaggcgaagctgctggcagaagctggtgtacaagaggttgtaaga
aaaaggaagaaaccaatcttgaagattggacacggtgggactctggatagtgcagcttca
ggagttctggtggttggtatcggaaaaggaacaaaactgctcggaggtctattggcaggt
tccaagaagtacacagtcattggggagctaggaaaagctaccgacacattagacgccaca
ggaaaagtaacagaagaaaagccttatgatcaaataacaaaaggagatcttgaaaaagtg
ctgcagaagttcacaggggacataatgcaagttcctccactctggtctgctttgaagaaa
gatggacaaaggctatcgtttctcatgaagaaaggagtagcagtggaagcaaagcccgct
cggccagttagagtttacaacctttctctccagaacttccagccgccgctgttcacgctg
gatgttgaatgtggcggtggcttttatgtcagaagcttggtcagtgacattggcaaagaa
ctctcttcctgtgccagtgtgcgagagctgacccgaaccaagcatgggccatttacccta
gaggagcacacgcttcatgaagacaaatggacaattgatgaaattgcacggtccctagag
cattgcatgtctcttctcccagaagaaccgtcacataaaaaattaaagaccgagcattcg
gaagaatctgctgtgagctgtgaagataagtga
DBGET
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