Alligator mississippiensis (American alligator): 102561950
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Entry
102561950 CDS
T03087
Symbol
CASC3
Name
(RefSeq) cancer susceptibility candidate 3
KO
K14323
protein CASC3
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03013
Nucleocytoplasmic transport
amj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102561950 (CASC3)
03015 mRNA surveillance pathway
102561950 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102561950 (CASC3)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102561950 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
102561950
NCBI-ProteinID:
XP_019332507
LinkDB
All DBs
Position
Un
AA seq
699 aa
AA seq
DB search
MADRRRQRASQDSEDDSDSAASDSADSAGSAARSASPXXXXPPAARTRGADSAAGAANSP
PESECESEDGIEGDAVLSDYESAEDSEAEEEDYSEEESSKVELKQDGNDSSESTAKAEKG
EEKPDSKGTVTGERQSGDGQESTEPIENKVGKKVPKHLDDDEDRKNPAYIPRKGLFFEHD
LRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKTRQELIALYGYDIRSAHNPDD
IKPRRMRKPRFGSPPQREPNWSHERQNKPPRYQGSDNTPAPPRTFISRSSAGTGRMPPPR
TYPRSGGYKENRPSYRAAEANGQHHSRNSEQAKHESSYRSKRVEQAPAREPSPEAEVATD
HNSPVKKEEIVLESQTTTTDAVQPPPDRPIEKKSYSRARRTRNKAGETGKLADEVPPPEG
LMLVSPKPVQVETPPPPAKTGSWETPVESSMDGLEQEMTQLNLTEQNWTPGQPQFIQPRE
LRSIPNHMHMGTGPPPQFNRMEEMAVQGSRAKRYSSQRQRPPVPEPAPPMHISIVEGHYY
DPLQFQGPIYTHSENPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPMGNPGLYPPPVSMPP
GQPPPQQLLAPTYFSPPGVMNFGNPSYPYPPGALPPPPPPHLYPNTQAQSQVYGGVTYYN
TVQQQVQPKPSPPRRTSQPVTIKPPPPELLVAGCKQGSS
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaggcggcggcagcgcgcctcgcaggacagcgaggacgactccgactcggcg
gcgtccgacagcgccgactcggcgggcagcgccgcccgctccgcctccccctgnnnnnnn
ngcccccccgcggcccgcacccggggggccgacagcgcggccggcgccgccaacagcccg
cccgagtccgagtgtgaaagtgaagatggcatcgaaggagatgctgttctctcagactat
gaaagtgcagaggactcagaggctgaggaagaggattacagtgaggaggaaagctcaaaa
gtggaactgaagcaggacggcaatgattctagtgagtccactgcaaaagcagagaaaggg
gaagagaaacccgattccaaaggcactgtgactggcgagagacaaagtggggatgggcag
gagagcactgaaccgattgagaataaagttgggaaaaaggtccctaagcacctggatgat
gatgaggatcggaagaatccagcttacatccctcgcaaagggctgttctttgagcatgat
ctccgaggacagacccaggaagaggaagtgaggcctaaaggtcgccagagaaaattatgg
aaagacgagggccgctgggaacatgacaaattccgggaagatgagcaagctccaaagacc
aggcaggagctgatagcactctatggctatgacatcaggtctgctcacaacccagatgac
atcaagccaaggaggatgcgcaagccaaggtttgggagccctccacagcgagagccaaat
tggtcccacgagaggcaaaacaagcctccaaggtaccagggctccgacaataccccggca
ccaccacgaacattcatcagccgaagttctgcaggcacagggaggatgcccccacccagg
acctatccaaggtcaggtggctacaaagagaatcgccctagctatcgagctgcagaagca
aatggccagcatcactctcgaaacagtgagcaggctaaacatgaaagcagctaccggtca
aagcgtgtggaacaagccccagcaagagaaccctcacccgaggctgaggttgcaactgat
cacaacagccctgttaagaaggaggagattgttttggaaagccagaccacaacaacagat
gctgtccagccacccccagatagacccattgaaaagaagtcttattctcgggcaagaagg
accaggaataaagctggagagacaggaaagctggctgatgaagtgccccctccggagggg
ctgatgctcgtgtctccaaaacctgtgcaggtagagacacccccaccaccagcaaagacc
ggaagctgggagaccccagtagaatccagcatggatggacttgaacaagaaatgacacag
ttgaatctaactgagcagaactggaccccagggcagcctcagtttatacaacctcgggaa
cttaggagtattcctaatcatatgcacatggggactggaccaccacctcagtttaacagg
atggaggaaatggcagtgcaggggagtcgtgcaaagcgttattcatcccagcgtcagaga
cccccagttccagagcctgcaccccccatgcacatcagcatcgtggaagggcattattat
gatccactacaattccagggaccaatctacacccacagcgagaaccctgccccattgccc
ccccagggtatgattgtacagcccgaaatgcatctcccccatccaggtttacatccacat
cagactccagcacctatggggaaccctggcttataccctccacctgtctccatgcctcct
gggcagcccccaccacagcagctacttgcacccacctatttctcccctcctggggtcatg
aattttgggaatcctagctacccctaccccccaggagcactcccgccacctcctcctccc
catctgtatcccaacacccaggcccagtctcaagtatatggaggggttacctactacaac
actgtccagcagcaggtacagccaaaaccttctccaccgcgaagaacatcacagcctgtg
accatcaaacccccaccccctgagcttctcgttgcaggttgtaagcagggctccagttaa
DBGET
integrated database retrieval system
