Alligator mississippiensis (American alligator): 102562006
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Entry
102562006 CDS
T03087
Symbol
ATG16L2
Name
(RefSeq) autophagy related 16 like 2
KO
K20868
autophagy-related protein 16-2
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102562006 (ATG16L2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102562006 (ATG16L2)
03029 Mitochondrial biogenesis [BR:
amj03029
]
102562006 (ATG16L2)
Membrane trafficking [BR:
amj04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
102562006 (ATG16L2)
Others
Specific organelles associated proteins
Auto phagosome
102562006 (ATG16L2)
Mitochondrial biogenesis [BR:
amj03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
102562006 (ATG16L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
ATG16
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_NWD2_C
Beta-prop_DCAF12
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_Nup120_160
Basic
DUF7310
PspA_IM30
YabA
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
102562006
NCBI-ProteinID:
XP_019343841
LinkDB
All DBs
Position
Un
AA seq
674 aa
AA seq
DB search
MTGIFLNLCFACRSPWEPPSPVLDPTVVLQTTKIKYQRQIAELKDLSGVLAYHIIELNTI
LKAKETELEVQRTRLASLQGQVSELEGQHQQLRGQMKGLGRGNSAVKLEYDALRDCYRCR
ECELRREVERSQELTESLVRKKAKAAEYKNYQNERFKRAKHDELFRQLKKVTNETISIDI
GPEEVKPAKGKGPSQDFTKLEDCEKPGKRPFRSSSATSMTIARCVDVFKGLFDYRLKRGN
SVSSRLESSYCYVPACVVACLPSFISDIQEAHLSEVNAVKFCPSSTMLATGGTDKLIKLW
NVVGGRLESVRTLEGANGSITSIEFDPMGCQILAASYNKAVQLWKIEDCKSRETLTGHTD
KVTAAKFRSTRYQAVTGSRDRTVKEWDLGKGACKWLQWALWEGELGYASCITSPMPAWLP
RSPTVAAASTVHQRAGQGVPAAQSDSRAPIPGLPPSGTVTACMGKLRHTAGKCLAWACGT
SVQTCKPVPWWHGSARATTVSPLYEEALWILGVGSVQDNQAQGCAGMLGPSLHCCLRVTP
PTCHPRGPRCTEVIPVEGKVTSLHISQDQMHLLSCSRDNTLKVIDLKMNNVRQVFSADGF
KCGSDWTKAIFSPDKSYILAGSSDGTLYVWSMENGKLVTSLPGLHGASVNAVAWSSSGQH
VVSVDQGKKVVLWK
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgacgggaatatttctgaacctctgcttcgcttgcaggtccccctgggagccccccagc
cctgtgctggaccccacggtagtgctgcagaccaccaagatcaagtaccaacggcagatc
gcggagctgaaagacttaagcggtgtcctggcgtatcacatcattgagctgaacacgatc
ctcaaggccaaggagaccgagctggaggtgcagagaaccaggctggcctctctgcagggc
caggtatcggagctggagggccagcatcagcagctgcgggggcagatgaagggcctgggc
cggggcaactcggccgtgaagctggagtacgacgcgctgcgggactgctaccggtgccgg
gagtgcgagctgcgcagggaggtcgagaggagccaggagctgaccgagagcctggtgcgg
aagaaggccaaggctgccgagtacaagaactaccagaacgagaggtttaaacgggcaaag
catgacgagctgttcaggcagctgaagaaggtgacaaatgagaccatcagcattgacatt
ggcccagaagaggtgaagccagccaaggggaaggggcccagccaggatttcaccaagctg
gaagactgcgagaagccagggaagagaccatttagatcatcctcagccacctccatgaca
atcgcccgctgtgtggatgtgttcaagggcttatttgattacaggctgaagcgtgggaac
tcggtcagcagccgcttggagtcaagctactgctatgtgcccgcctgcgtcgtggcctgc
ttgccatccttcatcagtgacatccaggaagcgcacctctcggaggtcaacgccgtcaag
ttttgccccagctccaccatgctggccacggggggcaccgacaagctcatcaagctctgg
aacgtggtgggagggaggctggaaagcgtgcggaccctggaaggtgccaacggcagcatc
accagcatcgagttcgaccccatgggctgccagatcctggcggcatcctacaacaaggca
gtgcagctgtggaagatcgaggactgcaaatccagagagacgctgacgggccacaccgac
aaggtgacggctgccaaattccgctccacgcgctaccaggcggtgacgggcagccgagac
cggaccgtgaaggagtgggacctgggcaaaggggcctgtaagtggctgcagtgggcgctg
tgggagggggagcttggctatgccagctgcataacctcccccatgccagcctggctcccc
aggtcaccaaccgtggctgctgccagcaccgtccaccaaagagcaggccagggggtgcct
gcagctcagagtgacagccgtgccccaataccagggctccctccctcgggcactgtgact
gcctgcatggggaaactgaggcacactgcagggaagtgccttgcctgggcctgtggcacc
agtgtccagacttgcaagcccgtgccatggtggcatggcagtgccagagctaccacagtt
tccccactttacgaggaggctttgtggatcttaggagttggctctgtgcaagacaaccag
gcgcagggctgtgcagggatgctgggaccctctttgcactgctgcctccgtgtaacgcct
cccacgtgccaccccaggggcccgcggtgcaccgaggtgatcccggtggaggggaaggtg
acctccctgcacatcagccaggaccagatgcacttgctgagctgctcccgcgacaacacg
ctcaaagtcatcgacctcaagatgaacaacgtccggcaggtcttcagcgctgacggcttc
aagtgcggatccgactggaccaaggcgatattcagccccgataagagctacatcctggcg
ggctcctcggacgggaccctctacgtgtggagcatggagaacgggaagctggtgacaagc
ctgccggggttgcacggagcctccgtgaatgccgtggcctggtcctcctcaggccagcat
gtcgtgagcgtggaccaggggaagaaggtggtgctctggaaatag
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integrated database retrieval system
