Alligator mississippiensis (American alligator): 102562025
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Entry
102562025 CDS
T03087
Symbol
TIAL1
Name
(RefSeq) TIA1 cytotoxic granule associated RNA binding protein like 1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102562025 (TIAL1)
03041 Spliceosome [BR:
amj03041
]
102562025 (TIAL1)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
102562025 (TIAL1)
Spliceosome [BR:
amj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
102562025 (TIAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Nup35_RRM_2
Calcipressin
RBD_AKAP-17A
Tmrp11_N
Motif
Other DBs
NCBI-GeneID:
102562025
NCBI-ProteinID:
XP_006267274
UniProt:
A0A151NU79
LinkDB
All DBs
Position
Un
AA seq
398 aa
AA seq
DB search
MEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQH
TSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDL
SPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLG
GRQIRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQT
FSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKN
FQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPSYGMYGQAWNQQGFGVDQSTSAAWMGG
FGAQPAQGQGAPVIPNQAGYGMASYQTQLFKLQEFPVS
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacgggcagcccaggaccctctatgtaggaaacctctccagagatgtaact
gaagtactaatacttcaattattcagccagattggaccgtgcaaaagctgtaaaatgatt
acagagcaacccgatagcagaagggtcaactcttctgttggattttctgttttgcagcat
acaagcaatgacccttattgctttgtggaattttatgaacacagagatgcagctgctgca
ttagctgctatgaatgggagaaaaattttgggaaaggaggtcaaagtaaactgggcaaca
acaccaagtagccagaaaaaagatacatccaatcacttccatgtgtttgttggggattta
agtccagaaataacaacagaagacatcaagtcagcatttgctccttttggtaaaatatcg
gatgcacgggtagttaaagatatggcaactggaaaatcaaaaggctatggctttgtatca
ttttataacaaactggatgcagaaaacgcaattgtgcacatgggaggccagtggttggga
ggccgtcagattagaactaactgggcaacacgaaaaccaccagcacctaaaagtacacaa
gaaaatagcacaaaacaactgagatttgaagatgtagtaaatcagtcaagtccaaaaaat
tgtactgtttactgtggaggaattgcctctggattaacagatcaacttatgagacaaaca
ttttcaccattcggacagatcatggaaataagagtttttccagagaaaggttactcattt
gtcaggttttcaacccacgaaagtgctgcacatgcaattgtttcagttaatggaactacg
attgaaggacatgttgttaaatgctattggggtaaagaatcccctgacatgactaaaaac
ttccaacaggtggactacagtcagtggggacagtggagtcaagtgtatggaaatcctcag
cagtatgggcaatacatggctaacgggtggcaagtaccatcatatggaatgtatggccaa
gcatggaatcaacagggatttggagtagaccaatctacatctgctgcctggatgggtgga
tttggtgctcagcctgcccagggacaaggtgctcctgtaatacctaaccaagctggatat
ggtatggcaagctaccaaacacaactattcaagctacaagagtttcccgtgtcttga
DBGET
integrated database retrieval system
