Alligator mississippiensis (American alligator): 102562083
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Entry
102562083 CDS
T03087
Symbol
PUS7
Name
(RefSeq) pseudouridylate synthase 7 (putative)
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amj03016
]
102562083 (PUS7)
Enzymes [BR:
amj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
102562083 (PUS7)
Transfer RNA biogenesis [BR:
amj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
102562083 (PUS7)
Prokaryotic type
102562083 (PUS7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H
Motif
Other DBs
NCBI-GeneID:
102562083
NCBI-ProteinID:
XP_006265270
LinkDB
All DBs
Position
Un
AA seq
651 aa
AA seq
DB search
METVDMTSVSLKRPHCEDGEANLDEIKRQKISEESSKTADGSDLKIDTVTGKSKKSLHED
TKDEIIPNEEGEEQENEELEESDDDGDAESFADMMKHGLTERDVGITKFVSSHKGFSGIL
KERYSDFVVHEIGKDGRVSHLDDFTVPVDNEDPSEEVFTVLSDEDKQRLEELQLFKNKET
SVAIEVIEDTKEKRTVIHQAVKSLFPGLETKTEDRDGKKYIVAYHAAGKKALANPRKHSW
PKSRGNYCHFVLYKENKDTMDAINVLSKFLRVKPNIFSYMGTKDKRAITVQEIAVLRITA
QRLAHLNKCLMNFKLGNFSYKSHPLKLGELQGNHFTVVLRNITGTDEQVQQAMQSLKEIG
FINYYGMQRFGTTAVPTYQIGRAILQNNWNEVMDLILKPRPGAEKGYLVKCREEWARTKD
PAAALKKLPVKRCVEGQLLRGLSKYGMKNIISAFGIIPRNNRLMYIHSYQSYVWNNTVSK
RIEEYGLKAVPGDLVLKGATAVHIEEADVEDYTIHDVVMPLPGFDVIYPKHKIGDAYKEM
LTADNLDINNMRHKIRDYSLSGAYRKIIIRPQNVNWEVVVYDDPKIPLFNTDLDKLEEKP
LPVLPKEGKFRALKMEFSLPPSTYATMAIREVLKMDTSIKNQTQLNTTWLR
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgtagacatgactagtgtatctctgaaacgtcctcattgtgaggatggagag
gctaacttggatgaaattaaaagacagaagatctcagaggagtcttctaagactgcagat
ggttctgacctgaaaattgatactgtgactggaaaatcaaagaaatcgttgcatgaggac
acaaaagatgaaataatcccaaatgaggaaggtgaggagcaagaaaatgaagaactggag
gaaagtgatgacgatggggatgcagagagctttgcagacatgatgaagcatgggctgaca
gagcgtgatgttggcataaccaaatttgttagctcacacaaagggttttctggaatctta
aaagagagatactctgacttcgttgttcatgaaataggaaaagatgggcgtgtaagccat
ttagatgactttactgttccagtggataatgaggatccttcagaggaagtatttacagtt
ttgtcagatgaggacaagcaacgtttagaagagctccagctttttaagaataaagaaacc
agtgttgctatagaggtcattgaagacaccaaagagaaaagaacagttatccaccaagct
gtgaagtccttgtttcctgggttagaaactaaaacagaagaccgagatgggaaaaaatat
attgttgcttatcatgctgctgggaaaaaggcactagcaaatccaagaaaacactcttgg
ccaaaatctaggggaaactactgtcactttgtattatataaggaaaacaaggatacaatg
gatgctattaatgtgctgtcaaagtttttaagagttaagccaaacatattttcctacatg
ggaaccaaagataaaagagcaataacagtccaagagattgctgttcttagaatcactgca
caaagacttgcacatttgaacaaatgtttgatgaactttaagttgggaaactttagttac
aagagccatccactgaaattgggagaactgcaagggaaccatttcacagttgttctcaga
aatataacaggaactgatgaacaagtacaacaagcaatgcagtctctcaaggaaattgga
ttcattaattattatggaatgcaaagatttggaaccacagctgttcctacatatcagata
ggaagagctattctacaaaataactggaatgaagtcatggatttaatattaaaaccacga
cctggagctgaaaaagggtatttagtaaaatgtagagaagagtgggcaaggactaaagac
ccagcagcggccctcaaaaaactacctgtaaaaaggtgtgtggaaggacagcttctacgg
ggactttcaaagtatggaatgaagaatataatctctgcatttggcataataccaaggaat
aatcgtctgatgtatattcatagctatcagagttacgtatggaataacactgtgagcaag
agaatagaagaatatgggcttaaagctgtaccaggagatcttgttcttaaaggagccaca
gctgttcatattgaggaagcagatgttgaggactatactatccatgatgtagtgatgcca
ttacctgggtttgatgttatatatccaaagcataaaattggtgatgcctacaaggaaatg
ctaactgctgacaatcttgatatcaacaacatgcgacacaaaattagagattactcatta
tctggagcttacagaaagatcatcattcgacctcagaatgtcaactgggaggttgttgta
tatgatgatcctaaaatcccattatttaatacggacttggacaaattggaggaaaaacca
ttacctgtccttcctaaagagggtaaattcagggccttgaagatggagttctctcttcct
ccttccacttacgctaccatggcaattcgagaagtcttaaaaatggacacgagtataaaa
aaccagacacagctgaatactacgtggcttcgctga
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