Alligator mississippiensis (American alligator): 102562176
Help
Entry
102562176 CDS
T03087
Symbol
PPRC1
Name
(RefSeq) peroxisome proliferator-activated receptor gamma, coactivator-related 1
KO
K17963
peroxisome proliferator-activated receptor gamma coactivator-related protein 1
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
amj03029
]
102562176 (PPRC1)
Mitochondrial biogenesis [BR:
amj03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
102562176 (PPRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
102562176
NCBI-ProteinID:
XP_014461897
LinkDB
All DBs
Position
Un
AA seq
1801 aa
AA seq
DB search
MPGVSALLGWTQEAGIPSVDRSQEHLSWAGHGIPGVDGSRGVSAPLLGWTQDAGIPSVDR
LQGHLCFWAGHRIPSVDRSQEHLSWAGHGIPGVDGSRGVSAPLLGWTQDAGIPSVDRLQG
HLCSWAGHGIPSVDGSQGHLSCTGRGNPSVDGSRGASVPGLQTRDPSARGRPGSGVGLAE
GRGSSQHPLSAAGGGTAGPQPPWPEGLVPTLAASHTRAREPGQGRSVPPTPPAPPAPPPQ
CFLLDEPSSLEEEMHSYWDSSVLSIIEDLGSHHENKGPLELHNELSLLTAITEILDGTDE
ATLSPFDTIVDTELLASPREQESCALQLLGLSQASPERDGPALEDQWGSWTQSGSSTPVV
AGKAETDVSWDRALSCQEDAVVTPKRPPSQARRGQRKPLRPWAQEQPALQRSDGEEEDDE
APSPRQDGSTAVGDLQTGTLSCPLEPASVEAGAEPQVAWLGEGDVPCIISPAGGSLCDLV
KSMHPYCLPAFATDLDAAPKLANKDLLAAPVMLGIVSGGDGQSLDTPVVFHPLGPGFPCL
DAPLPAREEGTAGGEGHSALESPAPEEPLPAEEGAQQHQVPTPALGSKATAPDAATPKET
LPEAAADAAPPEAGGRDRHLQSDSQPSTKAPAGGKCQGSGCGRGRERARKSRKKKSAEAP
STQVWPLGDSMASRLRSASSVPRRGSSEGQAPPSRATRPSAQVSNFLAEQLEQARKDAQL
ELRPSPAAPRPRGRPRGSRNRRSCPEPPREPAVDSPVAQSRAEQAVPSPKEQEAAAVERR
EESEPALCQASASPEPAPSTEQDAAGEAAQHPTPVEPAQAESQAATCPSREARPKALSLT
EYRQRMQHRAPGAGPGKEPEKQAAGKWPSIPEPPTELAEIPCLVAPPAQPLALPVETPGT
QKGPEKPASPPASSPPASKAPPAPALTTVAPVPPAPQLPFVAPPVTGAAPTGVVSALATP
YALYPPVPSWPCFGPPPSGFPPTLLPPPATTSPNAFHLVPGLPPPGLAWPPPAVPPPPPF
GPGAPYTPVGWGPALPPPYWPGVALPPLGPPLVFADPGSAPQSPSLSCPEPAAFAALPAP
PFVAAAPEVPAAAQASAAAPHAAADQPPAKASRASDPRRQARPAGRPSAAPAAATAQAAK
ELPAAAAQAKVPSAAAVKDPLVAPTEAVKEVPAVAVKELPAATVEDPPAAATGPVEEPPP
TRELPPACPSAKPARSPPGAVPAQAQPAPHSPADRETVCGRAPGAREGAKPPAARPWRHR
PLARPAQPSGCEDIVQAFISEIGIEASDLSSLLEQFEKTEAKKESSGVEAPKDKPSASSV
GRAEPQQDKKPLDSLQAPELANVAGLTPPATPPHQLWKPLAAVSLLAKPRSLSTTALEGA
QKTTKLIEAQPLPHGKPRGKPPPAMPPASSHVGAGDHDYCFLGSTGTPELGSRWNVKHHA
DITIKPIISLAPRTQDRPGPSLPAASAALGAPGAGRKPLDHRTSTPGRGSPPASVLLSPD
ASPCRDKETRTPSARPPRSGAKRALRCYRVRRDSGSPPDGTWRRQASRSFSASSNGGSEA
SSSSSSSSSSSSSSSSRSRSRSSSPPPKRWRRYRPRRSSRSRSSSPSSAGSCGSSRSSSS
ISYSSRSRSRSRSTSRSRSRSRSLSPCRRHSRRRRYSYDSQDHYQRQRLLQKERAIEERR
VVFIGKIPGRMTCSELRHRFSVFGDIEECTLHFRSEGDNYGFVTYRYAEEAFAAIERGHT
LRRPDEQPFDLCFGGRRQFCRRNYADLDSNREDFDPAPTRSKFDSLDFDTLLKQAQRSLR
T
NT seq
5406 nt
NT seq
+upstream
nt +downstream
nt
atgccaggggtgtctgcactcctgggctggacacaggaagctgggatccctagtgtagac
agatcccaggagcatctctcctgggctggacatgggatccctggtgtagacggatcccgg
ggcgtgtctgctccactcctgggctggacacaggacgctgggatccctagtgtagacaga
ctccaggggcatctgtgcttctgggctggacacaggatccctagtgtagacagatcccag
gagcatctctcctgggctggacatgggatccctggtgtagacggatcccggggcgtgtct
gctccactcctgggctggacacaggacgctgggatccctagtgtagacagactccagggg
catctgtgctcctgggctggacacgggatccctagcgtagatgggtcccagggacatctc
tcctgcactgggcgcgggaaccccagtgtagacggatcccggggcgcctctgtccctggg
ctgcagaccagggacccgtctgccaggggaaggcctggatctggcgtgggcctggctgag
gggagggggagctcccagcatcctctgtccgcggctgggggaggcaccgcaggcccgcag
cccccgtggccggaggggcttgtcccaacgctggcagcttcacacacacgcgcacgtgaa
cccgggcaaggccggtctgtgccccctaccccacctgctccccctgcccctcccccccag
tgcttcttgctggacgagccgtcctcgctcgaggaggagatgcacagctactgggactcc
tccgtcctgtccatcatcgaggacctcggctcccaccacgagaacaaaggccccttggag
ctgcacaacgagctgtcgttgctgacggccatcacggagatcctggatggcacggacgag
gcaaccctgtctccctttgacactatcgtggacaccgagctgctggcgtcgccccgggag
caggagagctgcgcgctccagctcctcggcttgtcccaggcctcccctgagcgggacggc
cctgccctggaggaccagtggggctcgtggactcagagcggcagcagcacgcccgtggtg
gctgggaaggctgagacggacgtgagctgggaccgtgctctgagctgccaggaagatgct
gtggtgacacccaagaggcccccgagccaggcgcggcgggggcaaaggaagccactccgg
ccctgggcacaggagcagccggccctgcagcgcagtgatggggaggaggaggacgacgag
gcacccagccccaggcaggacggcagcaccgccgtgggagacctccagacgggcaccctg
agctgccccctggagccagcaagtgtggaggccggagcagagccccaagtggcctggctg
ggggagggggacgtgccctgcatcatcagccccgcaggcggctccctgtgcgacctggtg
aagtccatgcacccctactgcctgcccgccttcgccaccgacctggatgctgcgcccaag
ttggccaacaaggacctgctcgctgcccccgtcatgctggggatcgtgtccggtggcgat
ggccagagcctggacacccctgttgtgttccacccgctgggcccaggcttcccctgcctc
gacgccccgctcccagccagggaggagggcactgctgggggtgaggggcatagtgccctg
gagtcccctgccccggaggagccattgcctgcggaggagggggcgcagcagcaccaggtg
cccacccctgctctggggagcaaagctacagcaccagatgcggccaccccaaaggagacc
ctgcccgaggcagcagctgacgcggccccaccagaggcaggcgggagggaccgtcatctt
caaagcgactcccagcccagcacgaaggcaccagcgggcgggaagtgccagggctccgga
tgcggccggggccgcgagcgagcacggaaaagccggaaaaagaagagcgcggaggcgccg
agcacccaggtctggccccttggagactccatggcctctcggctccgctcagcctcctct
gtcccgcggcgggggtcctctgaggggcaggcgccccccagccgggccacccgcccctcg
gcgcaggtgtccaacttcctggcagagcagctggagcaggccaggaaggatgcacagctg
gagctgcgcccaagccccgctgccccccggccacggggcaggccccggggctcccggaac
aggagaagctgccctgagcccccccgggagcctgcggtcgacagccccgtggcgcagagc
agagcagagcaggccgtgcccagcccaaaggagcaagaggcagcagctgtggagcgcagg
gaggagagcgagcctgccctgtgccaggccagcgccagcccggagcctgcccccagcacc
gagcaggatgccgcgggggaagctgcccagcaccccacacccgtggagcctgcacaagcc
gagagccaagcggccacatgtccctcacgggaagcccggcccaaggccctgagcctgacc
gagtaccgccagcgcatgcagcaccgtgcacccggcgccggccccggcaaggagcccgag
aagcaggcggccggaaagtggcccagcatccccgagccccccaccgagctggccgagatc
ccctgcctggtggcgccaccggcgcagcccctggccttgcctgtggagacgcccggcacg
caaaagggccccgagaaacctgccagcccacctgccagttctccgccggccagcaaggcc
cctccggccccagcactgaccaccgtggccccagtgccccccgcgccgcagctgcctttc
gtggcgccaccagtgaccggggctgctccaactggggtcgtgtcagccctggcgactcct
tacgccctctacccaccggtgccttcctggccttgctttggccccccgccctctggtttc
cccccgacgctgctgccaccaccggccaccacctcacccaatgccttccacctggtgcct
gggctgccacccccgggcctggcctggccgccgccagccgtgcccccgcccccacccttt
ggccctggcgctccatacacccccgtgggctggggcccggccctgccgcccccatactgg
cccggcgtggccctgcccccgttggggcctccactggtgttcgctgaccccgggagtgcc
ccacagagcccatcactgagttgtccagagccggcggcctttgctgcgctgcccgcgccg
ccgttcgttgctgctgcccctgaggtgccggcagccgcccaggcttctgctgcagctccg
cacgcagccgccgatcagcccccagccaaggcgagcagggcatctgaccccaggcggcag
gcacggcccgcggggaggccctcagctgcccccgctgctgctactgcacaggctgcaaag
gagctgccggctgcagctgcccaagccaaggtgccgtcggctgctgccgtgaaggaccca
ctggttgctcccaccgaggccgtgaaagaggttccggctgttgccgtgaaagagctgcca
gctgctaccgtggaagacccgccggctgctgcaactgggcccgtggaagagccccctcca
accagggagctgcctcccgcctgtccctcggcaaagccagccaggagcccgccaggagcc
gtgccagcacaagcccagccagcgcctcactcacctgctgaccgtgagaccgtctgcggg
agagcgccgggggcgcgagagggtgccaagccgcctgctgcccggccctggagacaccgg
cccctggcccgccccgcccagcccagcggctgcgaggatattgtccaggccttcatcagc
gagatcggcattgaagcctccgacctgtccagcctgctggagcagtttgagaagacggaa
gccaaaaaggagtcatcgggcgtggaggcgcccaaagacaagccgtctgccagcagcgtg
ggcagagcagagccgcagcaggacaagaagcccctggacagcctgcaggctcccgagctc
gccaacgtggcaggcctgaccccgccggcaacacccccccaccagctgtggaagcccctg
gccgccgtgtcactgctggccaagccgcggtccttgagcactaccgccctggagggtgcc
cagaagacaaccaagctcatcgaggcccagccactgccccatggcaagccccgagggaag
cccccgcctgccatgccccctgcctccagccacgtgggtgctggagaccatgactactgc
ttcctgggcagcaccggcacgcccgagctgggatcgcgctggaacgtgaagcatcacgcg
gacatcaccatcaagcccatcatctcccttgccccgcggacgcaggaccggcctggcccc
tcactacctgctgccagtgctgccctgggtgcccctggggccggccgcaagccactggat
caccggactagcaccccgggcaggggcagcccccccgcctcggtgctgctgtctccggac
gcgtccccctgccgggacaaggagacacggactcccagcgctcggcccccgcgctcgggt
gccaagagggccctacgctgctaccgtgtgcgccgggactcgggcagccccccagacggc
acctggcggcgccaagccagccgctccttcagcgccagctccaacgggggcagcgaggcg
tcctcttcctcctcctcctcctcctcctcctcctcctcttcctcctcgcggtcccgctcc
cggtcctcatcccccccacccaagcggtggcgcaggtaccggccgcggcgctcctcccgc
tcccgctcctcctcgccctccagcgccgggtcctgcggcagctcccgcagcagctcgtcc
atatcctactcgtcccggtcccgctcccgctcccggtccacatcccgcagccggtcccgg
tcccgctccctgtcgccctgcaggaggcacagccggaggaggcggtacagctacgactct
caggaccactaccaaaggcagagactcctgcagaaggaacgtgcaatagaggagaggcgg
gttgtcttcattgggaagatccccggcaggatgacgtgctcggagctgcggcaccgcttc
tccgtgttcggggacatcgaggagtgcaccctccacttccgctccgagggcgacaactac
ggcttcgtgacgtaccgctacgccgaggaggcctttgctgccatcgagcgcggccacacg
ctacggcgcccggatgagcagcccttcgacctctgctttggcgggcgacgccagttctgc
cgccgcaactatgccgacctggactcgaaccgggaggacttcgacccggctcccacccgc
agcaagttcgactctctcgacttcgacaccctgctgaagcaggcgcagcgcagcctgcgc
acgtag
DBGET
integrated database retrieval system
