Alligator mississippiensis (American alligator): 102562179
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Entry
102562179 CDS
T03087
Name
(RefSeq) structural maintenance of chromosomes protein 6
KO
K22804
structural maintenance of chromosomes protein 6
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amj03400
]
102562179
DNA repair and recombination proteins [BR:
amj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
102562179
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_29
VP9
AAA_21
DUF6381
Motif
Other DBs
NCBI-GeneID:
102562179
NCBI-ProteinID:
XP_014457108
LinkDB
All DBs
Position
Un
AA seq
1096 aa
AA seq
DB search
MGKRKEESVSKSGGHKRLRQEDADKYDDEPNEAEHSHLASGSNSCSQLTSGEVGIIESIQ
LKNFMCHSMLGPFQFGSNVNFVVGNNGSGKSAVLTALIVGLGGKATTTNRGSSLKVFVKD
GESSADVSITLRNQGRDAFKPDVYGDSIVVSQRINADGSRSYKLKSKSGTSVSCKKEELV
AILDHFNIQVDNPVSVLTQEMSKHFLQSKNEGDKYKFFMKATQLEQMKDDYSYIMKTKEN
TSLQIEQGVERLRELKQHYVEKKERYRTIGFVNEMRNYLEELKNKMAWAVVSEAEKEIKP
IQESISLEEGCTDKYVQKLNEWQVKVNEAEEKYKTIQDQLKKIHEEAQLLQPQCVSLKSE
LQARRRAYNEAEVLYNRFRTELRRLEKDDIQLRKRIEELKNSAEQISDPEKLERQRKITQ
LKEQLKVFSDQETVIGQQLQQFQQAIYEYREEHSTFKREELEVKQALDAKQRQLKELHES
KTNQLKRFGQHMPALLEAVEEAFRQGRFKEKPVGPLGVYLHLKDAELTLAVEACLKSLLR
AFCCDNHNDERTLQALMSRYYSPGTRPQIIVNRFRNEVYNVRCRAVYHPEFPSVLTALEI
DNAVVTNCLIDMRGIETVLLIKSSCVARKVMQSNKPPKNCREAFTAEGDQVFERRYYSSE
NTRPRFLSKDVDVEISLLENEVENKKAQLLTSQQHLHSIENEIRQNEDYLNQHRQHQKEL
QNKLRRINVEIMDLENVEEHQSVDISTLVDEAQENKNKMETVKGDMQKQKVIMEELKNNL
RAAEHKLEEIKDKIHQVEEVAGPVKDELNQVDSEMEKCKRHWQHYEEKQKQHLASINTQK
ELLASKEKKLKEKIAQAMQIYPERIEVDRTVKSLDTEMNRLREKINSEADRHGNRDEIIK
EFYEAKEKYEDAESKVKNLKKFIKLLDKIMTQRYKTYQQFRRCLTLRCILYFDFLLHQRG
YFGKMSFDHKNETLSITVQPGEGGKAALNDMRSLSGGERSFSTVCFILSLWSITESPFRC
LDEFDVYMDMVNRRISMDMMLKMADSQRHRQFILLTPQSMSSLPTSRLIRILRMQDPERG
QTTLNFQNRHQEQEDD
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagagaaaagaggaaagtgtttctaaatctggaggccataaaaggctaagacaa
gaagatgcggataagtatgatgatgaacctaatgaagcagagcattcacatctagcatct
ggcagcaattcttgctcacagttgacttcaggggaagttgggataattgaaagcatccaa
ctaaaaaactttatgtgccactcaatgctcggaccctttcagtttggatccaatgtcaat
tttgtggtgggaaacaatggaagtgggaagagtgctgtattaactgctcttattgttggt
cttggtggaaaagctaccacaactaatagaggatcttctttaaaagtatttgtaaaagat
ggagagtcttctgcagatgtttcaataacattacgaaaccaaggtagagatgcctttaag
ccagatgtttatggtgattctattgttgtcagtcagcgtattaatgcggatggaagtcgt
agttataaactgaaaagcaaatcagggacctcagtttcttgtaagaaagaggaacttgta
gcaatattggatcattttaacatacaggtagataatcctgtgtctgttttaacccaagag
atgagcaagcatttcttacagtctaaaaatgaaggtgacaagtacaagttctttatgaag
gcaacccagctggagcagatgaaagatgattattcatacattatgaaaactaaagaaaat
acatctctccagatagagcaaggagtagagcgtcttcgagaactaaagcaacactatgtg
gaaaaaaaggaacgttatagaaccattgggtttgtgaatgaaatgcgaaactatctagaa
gaactgaaaaacaaaatggcttgggcagtggtcagtgaggcagaaaaagaaataaaacca
atccaagagagcatcagtcttgaagaaggatgtacagataagtatgtccagaagctaaat
gaatggcaggtcaaagtaaatgaagcagaagaaaagtacaagaccatccaagatcagtta
aaaaagatacatgaagaagcacagctattacagcctcagtgtgtttctttgaaatcagaa
cttcaagcaagaagaagagcatacaatgaagctgaggttctttataatcgattcagaact
gaattaagacgactagaaaaggatgatatacagctacgcaaacggattgaagaactgaaa
aatagtgctgagcaaatttcagatcctgaaaaactggaaagacaaagaaaaatcacccag
ttgaaagagcagttaaaggtgttctctgatcaggaaactgtgattggtcaacagctgcaa
cagtttcagcaagctatatacgagtacagggaagaacattccacatttaagagagaagaa
cttgaagtgaaacaagcattggatgccaagcagagacagcttaaggagctgcatgagagt
aaaacaaatcagttgaaaaggtttggacaacacatgccagcccttcttgaagcagttgag
gaagcctttaggcaaggacgtttcaaagaaaaacctgttgggccactaggtgtttatctt
catctcaaagatgcagaacttactctagctgttgaagcttgtttaaagagtctgcttcga
gcattttgttgtgataatcataacgatgagagaacacttcaggccttgatgtcaagatat
tattcacctgggactcggccacaaataattgtgaacaggtttcggaatgaagtttataat
gtcagatgcagggcagtttatcacccagaattcccatcagtccttacagccctggaaata
gataacgcagtggttaccaactgtttgattgacatgcggggcatagaaacagtccttcta
attaaaagcagctgtgtggctcgtaaagtaatgcagagtaacaagcctccaaaaaactgt
cgagaagctttcactgctgaaggtgatcaggtgtttgagagacgatattactcctctgaa
aacactagacccaggttcctaagtaaagacgtagatgttgaaataagtctcctggaaaat
gaagttgaaaataagaaggcacagttgttaacatctcaacagcatttacattcgattgaa
aatgagatcagacaaaatgaagattatcttaatcaacatcgtcaacaccaaaaagaactg
cagaacaaactaagaagaataaacgtagaaataatggatctcgagaatgtagaagaacac
caatcagtggacatctctacactagtagatgaagctcaagaaaacaagaataagatggaa
actgttaaaggagatatgcaaaaacagaaggtgataatggaggaactgaagaataatcta
cgagcagctgaacataaacttgaagaaattaaagacaaaattcatcaagtagaagaagta
gctggtcctgtgaaggatgaattaaaccaagttgattcagaaatggaaaaatgtaaacgc
cactggcaacactacgaagaaaaacagaaacaacatttggcatccataaacacccaaaaa
gaacttctggcttctaaagaaaaaaaattgaaggaaaagattgcacaggccatgcaaatt
taccctgagaggatagaagtcgacagaaccgtaaagagtcttgacacagaaatgaatcgc
ttaagggaaaagataaattcagaagcagatcgtcatggaaacagagacgaaataataaag
gagttctatgaagcaaaggaaaaatatgaggatgcagaaagtaaagtgaaaaatctgaag
aaatttattaaactgttggataaaataatgacacagagatacaaaacgtatcagcagttc
agaaggtgccttactttacgatgcatactctactttgacttcttactacatcagcgtggt
tactttggtaaaatgagctttgaccacaagaatgaaacactttcaataacagtccagcct
ggagagggaggcaaggctgctctgaatgacatgagatctctatcaggaggtgaacgttcc
ttctcaaccgtttgtttcattctttctctgtggtccattactgaatctcctttcagatgc
ttggatgaatttgatgtctacatggacatggttaatagaagaatttcaatggacatgatg
ctgaagatggcagattctcagcgtcatcgacaatttattctgctcactccacaaagcatg
agttctctaccaacaagtcggcttattagaatcctccgaatgcaagatcctgaaagaggg
cagacaacactgaatttccaaaatagacaccaagagcaggaagatgattaa
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integrated database retrieval system
