Alligator mississippiensis (American alligator): 102562414
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Entry
102562414 CDS
T03087
Symbol
CD48
Name
(RefSeq) CD48 molecule
KO
K06479
CD48 antigen
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102562414 (CD48)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
amj04515
]
102562414 (CD48)
04090 CD molecules [BR:
amj04090
]
102562414 (CD48)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
amj00537
]
102562414 (CD48)
Cell adhesion molecules [BR:
amj04515
]
Immunoglobulin superfamily
SLAM/CD2 family
102562414 (CD48)
CD molecules [BR:
amj04090
]
Proteins
102562414 (CD48)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
amj00537
]
Receptors
102562414 (CD48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
V-set
V-set_2
Motif
Other DBs
NCBI-GeneID:
102562414
NCBI-ProteinID:
XP_014457228
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Position
Un
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AA seq
238 aa
AA seq
DB search
MATVLAVLLLSVLSCGKAEEKTKLMNGIVNGTVDLEPGIPILERYQQIKWFYNHTQQILK
KQKGKSVHYNNEYFKNKTKLFENGTLRIVRLRKEDSSKYKIIVEDEKGLEIPIMIQLNIY
APVPKPRLNVTSLKKTKGGCSVTLKCSVSIPDVTYTWYKDDKKCSYSELNGDLVLSLTSE
SNIMYNCTVCNSASCNTESIYYRGDCQWQDRNTASSTFRLAADSAVTLGILLLLHNLL
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggtgcttgctgtacttctgctttctgtgttgtcgtgcggcaaggctgaagag
aagacaaagctcatgaatgggattgttaatggcactgtggacttagaaccagggattccc
atcctggagagatatcagcaaatcaaatggttttacaaccatacccagcagatcctgaag
aagcagaagggcaagtcggttcattacaataatgagtattttaagaacaagacaaaattg
tttgagaacggcactctgcgtatcgtgaggcttcggaaggaagacagcagcaaatacaag
ataattgtggaagatgaaaaaggcctcgagatccctataatgatccagctgaacatctat
gctcctgtcccgaagcccaggttgaatgtcacttctttaaaaaagaccaaaggagggtgc
agtgtcaccttgaagtgctctgtcagtatccctgatgtgacgtacacatggtacaaggat
gacaagaaatgcagttattccgagttaaatggagacctggtcctctctctcacatcagaa
agcaacataatgtacaactgtactgtctgcaactccgccagctgcaacactgagtccata
tattaccgaggcgactgccaatggcaagacaggaacactgcctcgtccacgttccggctg
gcagctgattctgcggtgactctcgggatcctcctgctcctccataacttgctatga
DBGET
integrated database retrieval system
