Alligator mississippiensis (American alligator): 102562459
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Entry
102562459 CDS
T03087
Symbol
AMFR
Name
(RefSeq) autocrine motility factor receptor
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04137
Mitophagy - animal
amj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102562459 (AMFR)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
102562459 (AMFR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amj04121
]
102562459 (AMFR)
Enzymes [BR:
amj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
102562459 (AMFR)
Ubiquitin system [BR:
amj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102562459 (AMFR)
Multi subunit type E3
ERAD complex
102562459 (AMFR)
LMBR1L-GP78-UBAC2 complex
102562459 (AMFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
zf-C3HC4_2
CUE
zf-C3HC4
zf-C3HC4_3
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_16
Prok-RING_4
zf-C3HC4_4
zf-RING_Vps41
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
102562459
NCBI-ProteinID:
XP_006258816
LinkDB
All DBs
Position
Un
AA seq
638 aa
AA seq
DB search
MPLLFLERFPWPSLRTYAGLSALALLGCVLSAYRALSQAPAAWPGPEPQPQPEPQPSPSR
AGPLPLDVAYYLLSDSLCVWVLVNTACCFLMLVAKLIQCMVFGPLRVSERQHLKDKFWNF
IFYKFIFIFGVLNVQTVEEVVMWCLWFSGLVFLHLMVQLCKDRFEYLSFSPTTPLSSHIR
VLTLLIVMLLSCCGLAVVCGVIGSTHGMHTLAFMAAESLLVTVRTSHVILRYVIHLWDLN
HEGTWEGKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEV
QRRIRRHKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQSARKLPCGHLFHNSCL
RSWLEQDTSCPTCRMSLNITDSHRVREDHQRENLDENLGPVAVAEGRPRLNQHNHFFHFD
GSRIASWLPSFSVEVMHTTNILGITQASNSQLNAMAHQIQEMFPQVPYHLVLQDLQLTRS
VEITTDNILEGRIQVPFPTQRADSIRPALNSPVERHNSDQEDTETATQTERVLLELNPRL
EEMVEFSEMELEPSETEDFEARGSRFSKSADERQRMLVQRKEDLLQQARKHFLNKTSDED
SASERPSMPEGVTSDPVTLRRRTLAAAAERRLQMQQNS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgttgttcctggagcgtttcccctggcccagcctgcgcacgtacgcggggctc
agcgccctggcgctgctcggctgcgtcctcagcgcctaccgcgccctcagccaggcccct
gccgcctggcctgggcccgagccccagccccaacctgagccacagcccagcccgagccgt
gccgggccgctgccgctggacgtcgcctactatctgctgtcagacagcctttgcgtctgg
gtacttgtgaatactgcctgttgttttctgatgttagttgctaaattaatccagtgcatg
gtgtttggtcctcttcgagtcagtgagaggcagcatctcaaggacaaattctggaatttc
atcttctacaagtttatatttatttttggcgtgctcaatgttcagactgtggaagaagtt
gtcatgtggtgcctttggttctctgggctggtgtttctccatctcatggtacagctctgc
aaggatcggtttgaatatctttctttctcccccaccacaccattgagcagccacatcaga
gtccttactctactgattgtcatgttactctcctgttgtggattagcagttgtttgcggt
gttattggcagtacccatggaatgcacactctagccttcatggcagcagagtctctgctt
gtgacagtgagaacaagtcatgtgattttacgttatgtaattcatctttgggatctcaac
catgaaggaacatgggaaggcaaaggaacttatgtgtattatacagattttgtcatggaa
ttaaccttactttcactggacttaatgcatcatattcacatgttgctatttggcaacatc
tggttgtcgatggccagcctggtgatctttatgcagctgcgttacctgttccatgaggtt
cagcgtagaatccgccgtcataagaactacctgcgtgtggttggaaacatggaagccagg
tttgcagttgcaactcctgaagaactcgctgttaataatgatgattgtgccatttgctgg
gactccatgcagtctgcacgtaaacttccatgtgggcacctctttcacaactcatgccta
cgatcctggcttgaacaggacacatcctgccccacctgcagaatgtctcttaatatcaca
gacagtcatcgggttagagaggaccaccaaagagagaacctggatgaaaacttggggcct
gtggcagtagcagaaggcagaccccgcttgaaccaacataatcacttcttccattttgat
ggttctcgtattgctagctggctacccagtttttcagtggaagtgatgcatactaccaat
atccttggtattacacaggcaagcaactcccagctcaatgctatggcacatcagattcaa
gagatgtttcctcaggttccataccacctagttctgcaggatctgcagctgacccgctct
gtagaaataacaactgacaacatcttagaagggcgtatccaggtgccctttcctacacag
cgtgcagatagcattagacctgcattaaacagtcctgtggaaaggcataattctgatcag
gaggatactgaaacagctacccagactgagagagtgctgcttgaacttaatccaaggctg
gaagaaatggtggagttcagtgaaatggaattagagcccagtgagacagaagattttgag
gcaagaggaagtcgcttctccaagtcagctgatgaaagacagcggatgttagttcagcga
aaggaagacctgttacagcaggctcgaaagcattttttaaataaaacctctgacgaggac
tccgcctcagagaggccttctatgcctgagggtgttacctccgaccctgtcaccctgcgc
cgcagaacattagctgctgcagctgaacggagacttcagatgcaacagaactcctag
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integrated database retrieval system
