Alligator mississippiensis (American alligator): 102562469
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Entry
102562469 CDS
T03087
Symbol
SIAH1
Name
(RefSeq) siah E3 ubiquitin protein ligase 1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04115
p53 signaling pathway
amj04120
Ubiquitin mediated proteolysis
amj04137
Mitophagy - animal
amj04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102562469 (SIAH1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
102562469 (SIAH1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
102562469 (SIAH1)
09143 Cell growth and death
04115 p53 signaling pathway
102562469 (SIAH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amj04121
]
102562469 (SIAH1)
Enzymes [BR:
amj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102562469 (SIAH1)
Ubiquitin system [BR:
amj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
102562469 (SIAH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
102562469
NCBI-ProteinID:
XP_006262248
LinkDB
All DBs
Position
Un
AA seq
313 aa
AA seq
DB search
MTGKSAFSFLYPWKGVLSACLPGSKAGKRKEMSRQTATALPTGTSKCTPSQRVPALTGTT
ASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEK
VANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLM
HQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIV
QLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIAQLFAE
NGNLGINVTISMC
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgacggggaaatccgccttcagctttctgtacccgtggaagggcgtcctctccgcgtgc
ctgcctggaagtaaagccggcaagaggaaagaaatgagccgtcagactgctacagcactc
ccgacaggtacttcaaagtgtactccatcacagagggtgcctgcattaactggcactaca
gcttccaacaatgacttggctagtctttttgagtgtcctgtgtgttttgactatgtgctg
ccacctattcttcagtgtcagagtggccatcttgtttgtagcaactgtcgacccaagctc
acatgctgtccgacttgccgaggcccactgggctccattcgcaacttggctatggaaaaa
gttgccaactctgtactcttcccatgtaaatatgcctcttcaggatgtgagataaccttg
ccacacacagaaaaagcagaccatgaggagctgtgtgagtttaggccttattcatgtcca
tgtcctggtgcttcatgtaaatggcaaggttctctggatgctgtaatgccacatctaatg
catcaacataagtcaataacaacattacagggagaagatatagttttccttgctacagac
attaatctgcctggtgctgtcgactgggttatgatgcagtcttgttttggctttcatttc
atgttagtgctggagaaacaggaaaaatatgatggtcaccagcagttctttgcaattgta
cagctgataggaacacgcaagcaagcagaaaattttgcttatcgacttgagcttaatggt
cataggcggcgattgacttgggaagcaactcctcgctctattcatgagggaattgcaaca
gccattatgaacagtgactgtctagtctttgacaccagcattgcacagctttttgcagaa
aatggcaatttaggcatcaatgtaactatatcaatgtgttga
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