Alligator mississippiensis (American alligator): 102562522
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Entry
102562522 CDS
T03087
Symbol
SYDE1
Name
(RefSeq) synapse defective Rho GTPase homolog 1
KO
K20655
Rho GTPase-activating protein SYDE
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102562522 (SYDE1)
Membrane trafficking [BR:
amj04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
102562522 (SYDE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGAP
Motif
Other DBs
NCBI-GeneID:
102562522
NCBI-ProteinID:
XP_014453825
UniProt:
A0A151NV31
LinkDB
All DBs
Position
Un
AA seq
964 aa
AA seq
DB search
MAEPLLRRTFSRLRGRERLRRKKSDAKERERPLRTPDSPVELVPETGPSSEVVAAPDPDG
GCRKGAAITVSKKQNWARFSCGVRDEPRVSCRRKGPVSSKASPEPQDEGDGRSPDESPQS
PGQPRLLPSSPHMGELAMDEEDGGPGEGPLWPDGPRDEEAESLCSYAELGAAAGAMKGAS
HGAYLQSLERSSRHWVLSSGKALGPDESAPSTRAEQEPGAMGSEGEIWYNPIPEDEDVVG
TRQNTEPWRRWGSVASAQEPDQARMEPPHKPSSEAPSRSRAGGAESHSARTGLGPDAASQ
GKDEGAGRAQSCGKAPTMPCMSAEAVPGGPSPPPSPGAAKKGRALGRAKSPGTVRRLSMK
MKKLPELRRKLSLRSTRTRGPEAEGGGAMGSTSPRDARKESGNVISRYHLDSSVEARPGL
PRGKAASKGGYLSDGDSPELLAKSDKHTGAEPEPGTGPGLDVSSFQSYSFVEQPRCVQQL
SGLVSVHLYGLQDLRALRAEAREVFCVLQVDAAHKARTALLPGHAAFLRLNHTFNLELEG
AQLLKVVVFSWDPAAGRNRVCCHGTIILPHIFRGSRVQQLALQLEPRGILYVKLTLVEQW
DMPNAREPRVFGVELRQLVERENAVLKVPLLIQKCVARIERCGLKVVGLYRLCGSAAVKK
ELRDAFERDSAAVTLSEQLYPDINVITGILKDYLRELPTPLITPTLYHVVLEAMARRPPR
AGLSEREAMETVALLDCLPDIEKATLTMLLDHLSLVASFHDFNRMHAQNLAVCFGPVLLS
QSQDPRRPGARSYAHCEDIASAVDFKRHIEVLHYLLQAWPVPHRTEGPEGTQSSCLRPKR
HPALRLELLESQVVARHRPRGLESPPSNRYAGDWSVCGQEFLLLPGPGPGSGPGGEADYD
EVAGSDSEGEGTGLGGPSRTIFMGDFALVDDPEAPFSPRLNLKDFDALILDLERELSKPI
NVCL
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggccgagccgctgctgcgccggaccttctcgcggctgcggggcagggagcggctccgc
aggaagaagtccgatgccaaggagcgagagcgccccttgaggacaccggactctcctgtg
gagctggtgccagagacaggccccagttcagaggttgtggcagcgccagaccctgatggg
ggctgccggaagggagcagccatcactgtttccaagaagcagaactgggcccggttctca
tgtggggtccgggacgagccccgtgtctcctgtcgcaggaagggccccgtcagttcaaaa
gcctccccagagccccaggatgaaggtgatgggcgcagccctgatgagagcccccagagc
cctgggcagccacggttgctgccctcctcaccccacatgggggagctggctatggatgag
gaggacgggggacccggtgaaggtcccttgtggcctgacggccccagggacgaagaggct
gagtcactgtgcagctatgcagagttgggggctgccgctggtgccatgaagggggccagc
cacggtgcctacctgcagagtctggagcgcagcagccggcactgggtgctgtcctcaggg
aaggccctgggcccagatgagtcagctcccagcaccagggcagagcaggagccgggtgcc
atgggcagcgagggcgagatctggtacaaccccattcctgaggacgaggatgtggtgggc
accaggcagaacactgagccctggaggagatggggcagtgtggccagtgcccaggagccc
gaccaggcccggatggagccaccacacaagcccagcagtgaggcgccctcccggagcagg
gccgggggtgcagagagccacagtgcacggacagggctgggaccagatgcagccagtcaa
ggcaaagacgagggtgccggcagggcccagagctgcgggaaggctccgacgatgccatgc
atgagtgctgaagcagtgccaggtggcccgtcgcctccacctagccctggtgctgcaaag
aagggacgtgcccttggcagggccaagtccccgggcactgtgcgccgcctctccatgaag
atgaagaagttgcccgagctgcggaggaagctgagcctgcgcagcacccggacccggggg
cctgaggctgaggggggtggtgccatgggaagcacctcgccccgggatgcccgcaaggag
tctggcaatgtcatcagccgttaccacctggacagcagtgtggaggcccggccggggctg
ccccgtggcaaggcagctagcaagggtggctacctgagcgacggcgactccccagagctc
ctggccaagtcggacaagcacactggggctgagccagagccagggactgggcctgggctg
gacgtaagctcctttcaatcctacagctttgtggagcagccccgctgcgtgcagcagctc
tccggcctcgtaagtgtgcacctgtatgggctgcaggacctgcgggcgctgcgggctgag
gccagggaggtcttctgcgtgctgcaggtggacgcggcccacaaggcgcgcacagcactg
ctgcctggccatgctgccttcctgcgcctcaatcacaccttcaacctggagctggagggt
gcccagctgctcaaggttgtcgtcttctcctgggacccagctgctggccgcaaccgtgtc
tgctgccacggcaccatcatcctgccccacatattcagagggtcacgggtgcagcagctg
gcgttgcagctggagccgcgcggcatcctctatgtcaagctcacgctggtggagcagtgg
gatatgcccaatgcccgggagccacgggtcttcggtgtggagctgcgccagctggtggag
agggagaatgctgtcctcaaagtgcccttgctcatccagaagtgtgtggcccgtatcgag
cgatgtgggttgaaggtcgtggggttgtaccggctgtgcggctcagctgctgtgaagaag
gagcttcgcgacgcctttgagagggacagtgctgccgtgacactctccgagcagctctac
cctgacatcaatgtcatcacagggatcctaaaggactacttgcgagagctgcccacgccc
ctcatcacccccacactgtaccatgtggtgttggaggccatggcacggcggcccccccgg
gcggggctcagtgagagagaggcaatggagacagtcgccttgctggactgcctgcctgac
attgagaaggccacactgaccatgcttctggaccacctcagcctggtggcctccttccat
gatttcaaccgcatgcatgcgcagaacctggctgtctgcttcgggcctgtgctgctcagc
cagagccaggacccacggcgccccggcgcccgcagctatgcccactgcgaggacattgcc
agtgccgtcgacttcaagagacacattgaggtgctgcactacctgctccaggcctggccc
gtgccccacaggaccgagggcccggaggggacccagtccagctgcctacggcccaagcgc
catcctgctctgcggctggagctgttggagagccaggtggtggctcggcaccggccccgg
ggcctggagagcccccccagcaaccgctatgcaggggactggagcgtgtgtggccaggag
ttcttgctgctgccagggccggggccaggatcagggccaggaggtgaggctgactacgac
gaggtggctggtagtgacagcgagggtgagggcacgggcctgggtggccccagtcggacc
atcttcatgggggactttgcactggtggatgaccccgaggcaccattcagcccccgcctc
aacctcaaggacttcgatgccctcatcctggacctggagcgggagctctccaagcccatc
aacgtgtgcctctga
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