Alligator mississippiensis (American alligator): 102562539
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Entry
102562539 CDS
T03087
Symbol
DDX19B
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03013
Nucleocytoplasmic transport
amj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102562539 (DDX19B)
03015 mRNA surveillance pathway
102562539 (DDX19B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102562539 (DDX19B)
Enzymes [BR:
amj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102562539 (DDX19B)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102562539 (DDX19B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
102562539
NCBI-ProteinID:
XP_006275514
UniProt:
A0A151MJ32
LinkDB
All DBs
Position
Un
AA seq
479 aa
AA seq
DB search
MATDSWALAVDEQEAAAESLSNLHLKEEKTKPDSNGAVVKADDNAEKTEDEEKEDRAAQS
LLNKLIRSNLVDTTNQVEVLQRDPTSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE
NALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPGNKYPQCLCLSPTYELALQTGK
VIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFV
LDEADVMIATQGHQDQSIRIQRMLPRDCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKRE
EETLDTIKQYYVMCNNRDEKFQALCNIYGAITIAQAMIFCHTRKTAAWLAAELSKEGHQV
ALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAINMVDSKHSMNILNRIQEHFNKKIEKLDTDDLDEIEKIAN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcgtgggccctggcggtggacgagcaggaggcggccgccgagtcgttg
agcaacctgcacctgaaggaggagaaaaccaaaccagattccaatggtgctgttgtcaaa
gcagatgacaatgcagagaaaacagaggacgaggaaaaagaggacagagccgcccagtcc
ttgttaaacaagcttatccgcagtaacctggttgacacaacaaaccaagtggaggtactg
cagagagatcccacgtcacctctctactcagtgaagtcttttgaggagctgcgactgaaa
ccccaactcctgcaaggagtttatgccatgggcttcaaccgaccatctaaaatacaggag
aatgctttgcccatgatgcttgctgaacccccacagaacctgattgcccagtctcagtct
ggtactggtaagacagctgcctttgtcttggccatgctcagcagagttgaacctgggaac
aagtacccacagtgtttgtgcctttccccaacatacgagctggcacttcaaacaggaaaa
gtgattgaacagatgggaaagttttatccagagctgaaacttgcatatgctgtccgaggc
aataaattggagagaggtcagaagatctctgagcagattgtaattggcactcctggcact
gtcctggactggtgctccaagctgaaattcatagaccccaagaagatcaaagtgtttgtt
ttagatgaagcagatgtgatgatagcaacccagggtcatcaagaccagagcattcgcatt
cagagaatgctccccagagattgtcagatgcttctattttctgccacttttgaggattcg
gtgtggaaatttgctcagaaagttgttcctgacccaaacatcatcaaactgaagcgagag
gaggagacgctggacaccattaagcaatactacgttatgtgtaacaaccgagatgagaag
ttccaggctctctgtaatatctatggagccatcaccatcgcgcaggccatgattttctgt
catactcgtaaaacagctgcctggctggcagcagagctgtcaaaagaaggtcaccaggtg
gcattgctaagcggcgagatgatggtggaacaaagagccgcagttatagaacgtttccga
gagggcaaagagaaagtgctggtgacaacaaacgtctgtgccagagggattgatgtggaa
caagtgtctgttgttatcaactttgatcttcctgtggataaagatggaaatccagataat
gagacatatctgcatcggattggtcgtacaggtcgttttggcaaacgaggactcgctatt
aacatggtagacagcaagcacagcatgaatatcctcaacaggatccaagaacatttcaac
aaaaagatagaaaaattggataccgacgacttggatgaaatagagaaaatagccaactga
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